RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 ULK2Q8IYT8 1036 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 FAM81AQ8TBF8 368 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 CCDC110Q8TBZ0 833 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 ZNF184Q99676 751 aaPredicted RBP12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 APOL6Q9BWW8 343 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 SDCBP2Q9H190 292 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 CYP4F11Q9HBI6 524 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 TMEM165Q9HC07 324 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 STX18Q9P2W9 335 aaKnown RBP12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 ZNF112Q9UJU3 913 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 TTLL3Q9Y4R7 772 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 PCDHGA4Q9Y5G9 962 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 TEX264Q9Y6I9 313 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 IQANK1A0A1B0GTG1 560 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 KCNN4O15554 427 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 MAP3K7O43318 606 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 ITM2AO43736 263 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 SKIP12755 728 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 SCNN1BP51168 640 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 ZNF699Q32M78 642 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 LRRC38Q5VT99 294 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 LPCAT4Q643R3 524 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 MTHFD1LQ6UB35 978 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 RNF111Q6ZNA4 994 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 RSPH3Q86UC2 560 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 MOCOSQ96EN8 888 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 PHACTR1Q9C0D0 580 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 C17orf75Q9HAS0 396 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 MTO1Q9Y2Z2 717 aaKnown RBP12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 MAD1L1Q9Y6D9 718 aa12.43□□□□□ -0.42
CCDC144CP-201ENST00000340196 WDR81Q562E7 1941 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 HMX2A2RU54 273 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 MCF2LO15068 1137 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 ZSCAN9O15535 394 aaPredicted RBP12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 C6orf222P0C671 652 aaPredicted RBP12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 SPATA31D3P0C874 917 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 ANPEPP15144 967 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 RBL1P28749 1068 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 MAGEA8P43361 318 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 EPHB1P54762 984 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 PDE1BQ01064 536 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 OCRLQ01968 901 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 AP1B1Q10567 949 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 VWA5B1Q5TIE3 1220 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 C1orf146Q5VVC0 180 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 CEP128Q6ZU80 1094 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 SPATA31D4Q6ZUB0 917 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 GALNT15Q8N3T1 639 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 TRAPPC12Q8WVT3 735 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 NIF3L1Q9GZT8 377 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 PORCNQ9H237 461 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 EBF3Q9H4W6 596 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 WDR35Q9P2L0 1181 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 USP18Q9UMW8 372 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 STYXL1Q9Y6J8 313 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 DOCK1Q14185 1865 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 CAPN14A8MX76 684 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 RNASEH1O60930 286 aaKnown RBP12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 RFPL1O75677 317 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 ROR1Q01973 937 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 TRPC3Q13507 836 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 LBRQ14739 615 aaKnown RBP12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 SCYL2Q6P3W7 929 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 XYLT1Q86Y38 959 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 ZNF398Q8TD17 642 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 GATA6Q92908 595 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 GORASP1Q9BQQ3 440 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 DDX56Q9NY93 547 aaKnown RBP12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 PPP2R3BQ9Y5P8 575 aa12.42□□□□□ -0.42
CCDC144CP-201ENST00000340196 FAM189A1O60320 539 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 DNAJC6O75061 913 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 TOM1L1O75674 476 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 SUPT20HL2P0C7V6 817 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 HMGCS2P54868 508 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 SLC18A2Q05940 514 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 KCNJ11Q14654 390 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 CA9Q16790 459 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 SUPT20HL1Q3ZLR7 823 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 FAM102AQ5T9C2 384 aaPredicted RBP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 NBPF12Q5TAG4 269 aaPredicted RBP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 DCAF15Q66K64 600 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 DENND5BQ6ZUT9 1274 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 SCUBE1Q8IWY4 988 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 NDUFAF2Q8N183 169 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 PRPF31Q8WWY3 499 aaKnown RBP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 SLC7A3Q8WY07 619 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 LPAR1Q92633 364 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 E2F7Q96AV8 911 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 ZNF778Q96MU6 729 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 SSU72Q9NP77 194 aaKnown RBP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 ZNF302Q9NR11 478 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 ZC3H7BQ9UGR2 993 aaKnown RBP12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 BLOC1S6Q9UL45 172 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 ARID2Q68CP9 1835 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 ARHGAP42A6NI28 874 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 APOC4-APOC2K7ER74 178 aa12.41□□□□□ -0.42
CCDC144CP-201ENST00000340196 ATG7O95352 703 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms