RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 C17orf75Q9HAS0 396 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 DGKIO75912 1065 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 LDHAP00338 332 aaKnown RBP16.74■□□□□ 0.27
SCARB1-202ENST00000339570 LYNP07948 512 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 PDE1BQ01064 536 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 Q3C1V9 767 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 PPM1JQ5JR12 505 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 DRICH1Q6PGQ1 229 aaPredicted RBP16.74■□□□□ 0.27
SCARB1-202ENST00000339570 ALKBH8Q96BT7 664 aaKnown RBP16.74■□□□□ 0.27
SCARB1-202ENST00000339570 IFT122Q9HBG6 1241 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 PNPOQ9NVS9 261 aa16.74■□□□□ 0.27
SCARB1-202ENST00000339570 APOC4-APOC2K7ER74 178 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 TNNC2P02585 160 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 APOC2P02655 101 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 LY6KQ17RY6 165 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 ZNF667Q5HYK9 610 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 CWF19L1Q69YN2 538 aaKnown RBP16.73■□□□□ 0.27
SCARB1-202ENST00000339570 C7orf31Q8N865 590 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 TTC13Q8NBP0 860 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 SDCBP2Q9H190 292 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 MFHAS1Q9Y4C4 1052 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 GOLGA8QA0A0J9YX86 632 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 GOLGA8OA6NCC3 632 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 GOLGA8NF8WBI6 632 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 PRKCBP05771 671 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 FESP07332 822 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 NFICP08651 508 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 GSTT1P30711 240 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 RAB27AP51159 221 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 RTP1P59025 263 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 DSG1Q02413 1049 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 TMEM132BQ14DG7 1078 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 XYLT1Q86Y38 959 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 TMPRSS6Q8IU80 811 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 NMD3Q96D46 503 aaKnown RBP16.73■□□□□ 0.27
SCARB1-202ENST00000339570 B3GNT5Q9BYG0 378 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 UNKQ9C0B0 810 aaKnown RBP16.73■□□□□ 0.27
SCARB1-202ENST00000339570 TLE6Q9H808 572 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 PDLIM7Q9NR12 457 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 MYOCOSA0A1B0GUC4 107 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 MAGEA13PA6NCF6 341 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 NEMP1O14524 444 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 AHCYL1O43865 530 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 RNASEH1O60930 286 aaKnown RBP16.73■□□□□ 0.27
SCARB1-202ENST00000339570 TFE3P19532 575 aaPredicted RBP16.73■□□□□ 0.27
SCARB1-202ENST00000339570 NAMPTP43490 491 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 YWHAEP62258 255 aaKnown RBP16.73■□□□□ 0.27
SCARB1-202ENST00000339570 AP2B1P63010 937 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 TRIP10Q15642 601 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 RABGAP1LQ5R372 815 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 SCUBE3Q8IX30 993 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 CLMNQ96JQ2 1002 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 WRNIP1Q96S55 665 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 RNPEPQ9H4A4 650 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 PLLPQ9Y342 182 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 TEX264Q9Y6I9 313 aa16.73■□□□□ 0.27
SCARB1-202ENST00000339570 MICAL2O94851 1124 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 TRUB2O95900 331 aaKnown RBP16.72■□□□□ 0.27
SCARB1-202ENST00000339570 ASPAP45381 313 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 CLCN3P51790 818 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 CUL3Q13618 768 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 TNS4Q8IZW8 715 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 GPRASP2Q96D09 838 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 WWP1Q9H0M0 922 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 TAGLN3Q9UI15 199 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 TTLL3Q9Y4R7 772 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 AFG3L2Q9Y4W6 797 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 TCRBV5S1A1TA0A578 114 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 E9PBE3 544 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 CFLARO15519 480 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 KLHL41O60662 606 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 OR6B1O95007 311 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 NPTXRO95502 500 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 CD1EP15812 388 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 BTKQ06187 659 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 CDC16Q13042 620 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 FASTKD1Q53R41 847 aaKnown RBP16.72■□□□□ 0.27
SCARB1-202ENST00000339570 LRRC38Q5VT99 294 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 ATG16L1Q676U5 607 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 UNC5AQ6ZN44 842 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 HPS6Q86YV9 775 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 BRSK2Q8IWQ3 736 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 ADAM32Q8TC27 787 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 WDR35Q9P2L0 1181 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 WDR27A2RRH5 827 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 A6NJR5 290 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 DKC1O60832 514 aaKnown RBP eCLIP16.72■□□□□ 0.271e-7■■■■□ 19.3
SCARB1-202ENST00000339570 METTL18O95568 372 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 USP4Q13107 963 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 HIC1Q14526 733 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 SPNS2Q8IVW8 549 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 ANKRD36BP1Q96IX9 119 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 ECSITQ9BQ95 431 aa16.72■□□□□ 0.27
SCARB1-202ENST00000339570 DHX35Q9H5Z1 703 aaKnown RBP16.72■□□□□ 0.27
SCARB1-202ENST00000339570 XAB2Q9HCS7 855 aaKnown RBP16.72■□□□□ 0.27
SCARB1-202ENST00000339570 NRXN2Q9P2S2 1712 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 PEX2P28328 305 aa16.71■□□□□ 0.27
SCARB1-202ENST00000339570 GBE1Q04446 702 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms