RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ZNF410Q86VK4 478 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 LDHDQ86WU2 507 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 CLPTM1LQ96KA5 538 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 TMEM206Q9H813 350 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 NPHS2Q9NP85 383 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 GID8Q9NWU2 228 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 WHRNQ9P202 907 aa13.07□□□□□ -0.32
DFFB-202ENST00000339350 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
DFFB-202ENST00000339350 PLS3P13797 630 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 TCF4P15884 667 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 CDH2P19022 906 aaPredicted RBP13.06□□□□□ -0.32
DFFB-202ENST00000339350 ITIH2P19823 946 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 ANKRD20A4Q4UJ75 823 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 PRAMEF18Q5VWM3 479 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 ACAD10Q6JQN1 1059 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 PPP1R21Q6ZMI0 780 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 GALNT4Q8N4A0 578 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 NT5C1BQ96P26 610 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 C10orf88Q9H8K7 445 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 SNX9Q9Y5X1 595 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 IKBKGQ9Y6K9 419 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 UBE4BO95155 1302 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 A8MU76 341 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 TMCC2O75069 709 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 MYCLP12524 364 aaPredicted RBP13.06□□□□□ -0.32
DFFB-202ENST00000339350 EIF2AK2P19525 551 aaKnown RBP13.06□□□□□ -0.32
DFFB-202ENST00000339350 RFX1P22670 979 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 PHKA2P46019 1235 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 SLC45A4Q5BKX6 768 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 XKR9Q5GH70 373 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 NLRX1Q86UT6 975 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 DDX1Q92499 740 aaKnown RBP13.06□□□□□ -0.32
DFFB-202ENST00000339350 PTCD3Q96EY7 689 aaKnown RBP13.06□□□□□ -0.32
DFFB-202ENST00000339350 OSBPL6Q9BZF3 934 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 PAIP1Q9H074 479 aaKnown RBP13.06□□□□□ -0.32
DFFB-202ENST00000339350 SAYSD1Q9NPB0 183 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 MAN1C1Q9NR34 630 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 SACM1LQ9NTJ5 587 aa13.06□□□□□ -0.32
DFFB-202ENST00000339350 BRCA2P51587 3418 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 TMEM114B3SHH9 223 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 HNRNPCL1O60812 293 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 GUCY1B2O75343 617 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 ZWINTO95229 277 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 ZBTB7AO95365 584 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 ATF7P17544 494 aaPredicted RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 YWHABP31946 246 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 SUZ12Q15022 739 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 IL23RQ5VWK5 629 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 FYB2Q5VWT5 728 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 KRT39Q6A163 491 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 ZCCHC8Q6NZY4 707 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 SV2AQ7L0J3 742 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 C7orf43Q8WVR3 580 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 NSL1Q96IY1 281 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 PANX3Q96QZ0 392 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 RBM15Q96T37 977 aaKnown RBP eCLIP13.05□□□□□ -0.32
DFFB-202ENST00000339350 MXRA8Q9BRK3 442 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 ZDHHC7Q9NXF8 308 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 APPL1Q9UKG1 709 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 GRID1Q9ULK0 1009 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 A0A088AWK7 358 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 DPEP1P16444 411 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 KRT15P19012 456 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 SERPINB6P35237 376 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 GPC3P51654 580 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 SLC5A3P53794 718 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 PLCB3Q01970 1234 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 EFTUD2Q15029 972 aaKnown RBP eCLIP13.05□□□□□ -0.32
DFFB-202ENST00000339350 C12orf50Q8NA57 414 aaPredicted RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 GIPC2Q8TF65 315 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 IDI2Q9BXS1 227 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 ALG13Q9NP73 1137 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 GIN1Q9NXP7 522 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 NR2E3Q9Y5X4 410 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 CEPT1Q9Y6K0 416 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 EXOC1LA0A1B0GW35 172 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 DENND3A2RUS2 1198 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 MTA2O94776 668 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 CHEK2O96017 543 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 PEX2P28328 305 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 PPARGP37231 505 aaPredicted RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 PDAP1Q13442 181 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 PTK6Q13882 451 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 PKN2Q16513 984 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 PLEKHG4Q58EX7 1191 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 SCARA3Q6AZY7 606 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 ERI1Q8IV48 349 aaKnown RBP13.05□□□□□ -0.32
DFFB-202ENST00000339350 C7orf57Q8NEG2 295 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 PIP4K2CQ8TBX8 421 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 FAM213AQ9BRX8 229 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 TMOD2Q9NZR1 351 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 NEU2Q9Y3R4 380 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
DFFB-202ENST00000339350 ASTN2O75129 1339 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms