RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 VPS18Q9P253 973 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 ATP8A1Q9Y2Q0 1164 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 DNALI1O14645 258 aaPredicted RBP16.94■□□□□ 0.3
HPS1-202ENST00000338546 ITGA8P53708 1063 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 RNASELQ05823 741 aaKnown RBP16.94■□□□□ 0.3
HPS1-202ENST00000338546 NOMO1Q15155 1222 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 TERF2Q15554 542 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 HIBCHQ6NVY1 386 aaPredicted RBP16.94■□□□□ 0.3
HPS1-202ENST00000338546 ZNF280BQ86YH2 543 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 P3H4Q92791 437 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 FAM149B1Q96BN6 582 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 PSD3Q9NYI0 1048 aa16.94■□□□□ 0.3
HPS1-202ENST00000338546 CFAP69A5D8W1 941 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 I3L4J1 428 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 APOL1O14791 398 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 ZBED1O96006 694 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 F9P00740 461 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 IBSPP21815 317 aaPredicted RBP16.93■□□□□ 0.3
HPS1-202ENST00000338546 L1CAMP32004 1257 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 NR2C2P49116 596 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 SULT1E1P49888 294 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 MORF4L2Q15014 288 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 CCDC142Q17RM4 750 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 PAN2Q504Q3 1202 aaKnown RBP16.93■□□□□ 0.3
HPS1-202ENST00000338546 DCAF6Q58WW2 860 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 IZUMO3Q5VZ72 239 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 DENND2CQ68D51 928 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 DCP1BQ8IZD4 617 aaKnown RBP16.93■□□□□ 0.3
HPS1-202ENST00000338546 OR10T2Q8NGX3 314 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 RSAD2Q8WXG1 361 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 FAM118BQ9BPY3 351 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 TMEM109Q9BVC6 243 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 MRPL9Q9BYD2 267 aaKnown RBP16.93■□□□□ 0.3
HPS1-202ENST00000338546 ULBP1Q9BZM6 244 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 PHACTR1Q9C0D0 580 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 CRISPLD2Q9H0B8 497 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 ADAM21Q9UKJ8 722 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 TPX2Q9ULW0 747 aaKnown RBP16.93■□□□□ 0.3
HPS1-202ENST00000338546 AP4E1Q9UPM8 1137 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 USP3Q9Y6I4 520 aa16.93■□□□□ 0.3
HPS1-202ENST00000338546 GOLGA6CA6NDK9 693 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 HMGB1P1B2RPK0 211 aaPredicted RBP16.92■□□□□ 0.3
HPS1-202ENST00000338546 SGK1O00141 431 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 ZNF189O75820 626 aaPredicted RBP16.92■□□□□ 0.3
HPS1-202ENST00000338546 ITGB1P05556 798 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 MYZAPP0CAP1 466 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 GOLGA6DP0CG33 693 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 OR1G1P47890 313 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 NDUFV1P49821 464 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 ZNF135P52742 658 aaPredicted RBP16.92■□□□□ 0.3
HPS1-202ENST00000338546 EIF3EP60228 445 aaKnown RBP16.92■□□□□ 0.3
HPS1-202ENST00000338546 DYNLT1P63172 113 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 MTFR1Q15390 333 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 NFE2Q16621 373 aaPredicted RBP16.92■□□□□ 0.3
HPS1-202ENST00000338546 RAB6CQ53S08 254 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 CEP85LQ5SZL2 805 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 CRIPAKQ8N1N5 446 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 PLD5Q8N7P1 536 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 RIN2Q8WYP3 895 aaPredicted RBP16.92■□□□□ 0.3
HPS1-202ENST00000338546 NTAN1Q96AB6 310 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 FUBP3Q96I24 572 aaKnown RBP eCLIP16.92■□□□□ 0.3
HPS1-202ENST00000338546 KCNK16Q96T55 309 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 TMEM175Q9BSA9 504 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 COLEC11Q9BWP8 271 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 OXCT2Q9BYC2 517 aaPredicted RBP16.92■□□□□ 0.3
HPS1-202ENST00000338546 RAB6CQ9H0N0 254 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 TMBIM4Q9HC24 238 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 GOLGA6AQ9NYA3 693 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 LRFN2Q9ULH4 789 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 FZD10Q9ULW2 581 aa16.92■□□□□ 0.3
HPS1-202ENST00000338546 A6NNZ2 444 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 DCDC2CA8MYV0 355 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 CAPN9O14815 690 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 TADA2AO75478 443 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 LTFP02788 710 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 RBP3P10745 1247 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 BCAR1P56945 870 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 ZNF844Q08AG5 666 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 XRCC4Q13426 336 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 TRIP13Q15645 432 aaPredicted RBP16.91■□□□□ 0.3
HPS1-202ENST00000338546 P3H1Q32P28 736 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 TUBB8Q3ZCM7 444 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 ZC3H12AQ5D1E8 599 aaKnown RBP16.91■□□□□ 0.3
HPS1-202ENST00000338546 EMC10Q5UCC4 262 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 C4orf22Q6V702 233 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 SLC39A5Q6ZMH5 540 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 BZW1Q7L1Q6 419 aaKnown RBP16.91■□□□□ 0.3
HPS1-202ENST00000338546 SPATA2LQ8IUW3 424 aaPredicted RBP16.91■□□□□ 0.3
HPS1-202ENST00000338546 ZCCHC9Q8N567 271 aaKnown RBP16.91■□□□□ 0.3
HPS1-202ENST00000338546 PQLC3Q8N755 202 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 PCDH19Q8TAB3 1148 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 FAM76AQ8TAV0 307 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 CASD1Q96PB1 797 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 TMEM121Q9BTD3 319 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 ZCWPW1Q9H0M4 648 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 EPB41L4BQ9H329 900 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 NRDE2Q9H7Z3 1164 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 SHOC2Q9UQ13 582 aa16.91■□□□□ 0.3
HPS1-202ENST00000338546 COL4A4P53420 1690 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms