RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 ZNF487B1APH4 448 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 NT5C1B-RDH14C9J2C7 533 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 TNFRSF10BO14763 440 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 DAPK3O43293 454 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 EFCAB14O75071 495 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 ECEL1O95672 775 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 CYP2F1P24903 491 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 PBX3P40426 434 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 CDH6P55285 790 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 NNTQ13423 1086 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 SYPL2Q5VXT5 272 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 VSTM1Q6UX27 236 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 SYDE1Q6ZW31 735 aaPredicted RBP16.14■□□□□ 0.17
LIMS1-202ENST00000338045 UBE2Q1Q7Z7E8 422 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 CEP57Q86XR8 500 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 ATL2Q8NHH9 583 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 GRK7Q8WTQ7 553 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 OXCT2Q9BYC2 517 aaPredicted RBP16.14■□□□□ 0.17
LIMS1-202ENST00000338045 STAP1Q9ULZ2 295 aa16.14■□□□□ 0.17
LIMS1-202ENST00000338045 LIASO43766 372 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 LTFP02788 710 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 RAG1P15918 1043 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 MAGEA11P43364 429 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 ALDH7A1P49419 539 aaKnown RBP16.13■□□□□ 0.17
LIMS1-202ENST00000338045 SULT1E1P49888 294 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 ATXN1P54253 815 aaKnown RBP16.13■□□□□ 0.17
LIMS1-202ENST00000338045 SNX1Q13596 522 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 DPYSL3Q14195 570 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 CASP8Q14790 479 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 DPYSL2Q16555 572 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 ERMARDQ5T6L9 678 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 BEND5Q7L4P6 421 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 DDX42Q86XP3 938 aaKnown RBP eCLIP16.13■□□□□ 0.17
LIMS1-202ENST00000338045 MAP7D3Q8IWC1 876 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 RNF168Q8IYW5 571 aaPredicted RBP16.13■□□□□ 0.17
LIMS1-202ENST00000338045 PGAP3Q96FM1 320 aaPredicted RBP16.13■□□□□ 0.17
LIMS1-202ENST00000338045 FRMD8P1Q9BZ68 369 aaPredicted RBP16.13■□□□□ 0.17
LIMS1-202ENST00000338045 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
LIMS1-202ENST00000338045 TMEM51Q9NW97 253 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 FAM53CQ9NYF3 392 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 RRN3Q9NYV6 651 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 NAALADL1Q9UQQ1 740 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 NEU2Q9Y3R4 380 aa16.13■□□□□ 0.17
LIMS1-202ENST00000338045 CST8O60676 142 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 AMHP03971 560 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 IL4RP24394 825 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 PITX1P78337 314 aaPredicted RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 ZC3H12AQ5D1E8 599 aaKnown RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 RTP2Q5QGT7 225 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 ANKS3Q6ZW76 656 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 PSTKQ8IV42 348 aaKnown RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 CNPY4Q8N129 248 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 TMEM199Q8N511 208 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 TTC13Q8NBP0 860 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 NKD2Q969F2 451 aaPredicted RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 FAF2Q96CS3 445 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 B3GALT6Q96L58 329 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 CALN1Q9BXU9 219 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 PCDH18Q9HCL0 1135 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 ABI2Q9NYB9 513 aaPredicted RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 PCDHB5Q9Y5E4 795 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 H7C4K7 107 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 RDXP35241 583 aaKnown RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 GRIK1P39086 918 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 SLC5A3P53794 718 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 WDR5P61964 334 aaKnown RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 DEFB103AP81534 67 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 SMARCB1Q12824 385 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 OASLQ15646 514 aaKnown RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 CA9Q16790 459 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 KCTD19Q17RG1 926 aaPredicted RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 TAS1R1Q7RTX1 841 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 SLC35B2Q8TB61 432 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 C8orf48Q96LL4 319 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 ZNF670Q9BS34 389 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 TTPALQ9BTX7 342 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 DPH5Q9H2P9 285 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 GPATCH2LQ9NWQ4 482 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 DNPEPQ9ULA0 475 aa16.12■□□□□ 0.17
LIMS1-202ENST00000338045 DRG1Q9Y295 367 aaKnown RBP16.12■□□□□ 0.17
LIMS1-202ENST00000338045 M0QYT0 321 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 CAPN9O14815 690 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 TRIM66O15016 1216 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 BAIAP3O94812 1187 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 GAS8O95995 478 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 FAM153BP0C7A2 387 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 GBP1P32455 592 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 LMNB2Q03252 620 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 KRT17Q04695 432 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 MMRN1Q13201 1228 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 GPR17Q13304 367 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 PTK6Q13882 451 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 BYSLQ13895 437 aaKnown RBP16.11■□□□□ 0.17
LIMS1-202ENST00000338045 HLTFQ14527 1009 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIMS1-202ENST00000338045 KRT81Q14533 505 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 FAM153CQ494X1 144 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 RSPO2Q6UXX9 243 aaPredicted RBP16.11■□□□□ 0.17
LIMS1-202ENST00000338045 SND1Q7KZF4 910 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIMS1-202ENST00000338045 CCDC185Q8N715 623 aa16.11■□□□□ 0.17
LIMS1-202ENST00000338045 SCAMP5Q8TAC9 235 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms