RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 ST13P4Q8IZP2 240 aaPredicted RBP6.72□□□□□ -1.33
HMG20A-201ENST00000336216 MAB21L3Q8N8X9 362 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 IPMKQ8NFU5 416 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 SHC3Q92529 594 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 NSL1Q96IY1 281 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 ZNF560Q96MR9 790 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 GAD1Q99259 594 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 SYT15Q9BQS2 421 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 B3GNT5Q9BYG0 378 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 MROH8Q9H579 483 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 MANSC1Q9H8J5 431 aa6.72□□□□□ -1.33
HMG20A-201ENST00000336216 SNED1Q8TER0 1413 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 UBA6A0AVT1 1052 aaPredicted RBP6.71□□□□□ -1.33
HMG20A-201ENST00000336216 DNAJC6O75061 913 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 ZWINTO95229 277 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 CCDC130P13994 396 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 TPH1P17752 444 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 BGNP21810 368 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 HSD17B4P51659 736 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 TAS2R40P59535 323 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 SP2Q02086 613 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 CAV1Q03135 178 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 USP4Q13107 963 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 PPP1R15BQ5SWA1 713 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 ANO7Q6IWH7 933 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 SPOCD1Q6ZMY3 1216 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 CRLF3Q8IUI8 442 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 FAM71AQ8IYT1 594 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 EFCAB3Q8N7B9 438 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 SLC2A14Q8TDB8 520 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 TCP10LQ8TDR4 215 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 NDRG1Q92597 394 aaKnown RBP6.71□□□□□ -1.33
HMG20A-201ENST00000336216 ZNF75CPQ92670 426 aaPredicted RBP6.71□□□□□ -1.33
HMG20A-201ENST00000336216 ART4Q93070 314 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 PPWD1Q96BP3 646 aaKnown RBP6.71□□□□□ -1.33
HMG20A-201ENST00000336216 MTBPQ96DY7 904 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 CENPKQ9BS16 269 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 SIX2Q9NPC8 291 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 ARHGEF3Q9NR81 526 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 PACSIN3Q9UKS6 424 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 STXBP5LQ9Y2K9 1186 aa6.71□□□□□ -1.33
HMG20A-201ENST00000336216 MEI4A8MW99 385 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 TRIM49D1C9J1S8 452 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 USP1O94782 785 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 LINGO3P0C6S8 592 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 ATP6V1C1P21283 382 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 MIPP30301 263 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 RABGGTBP53611 331 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 GCNT1Q02742 428 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 NSUN2Q08J23 767 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 SLC1A5Q15758 541 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 ZACNQ401N2 412 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 FASTKD1Q53R41 847 aaKnown RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 HYIQ5T013 277 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 LRRC74BQ6ZQY2 392 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 SLFN11Q7Z7L1 901 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 ZBED2Q9BTP6 218 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 VPS33BQ9H267 617 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 PLEKHA5Q9HAU0 1116 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 XPNPEP1Q9NQW7 623 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 WHRNQ9P202 907 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 WDR35Q9P2L0 1181 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 CACNG4Q9UBN1 327 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 RGS17Q9UGC6 210 aaPredicted RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 PCYOX1Q9UHG3 505 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF214Q9UL59 606 aaPredicted RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 ECM29Q5VYK3 1845 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 BTNL10A8MVZ5 291 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 USP2O75604 605 aaPredicted RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 RECQL4O94761 1208 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 IL18RAPO95256 599 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 TPBGLP0DKB5 382 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 MUTP22033 750 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 AMPD1P23109 780 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 HOXD13P35453 343 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 ABL2P42684 1182 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 TAF6P49848 677 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 TPD52P55327 224 aaPredicted RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 WDR4P57081 412 aaKnown RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 ZNF200P98182 395 aaPredicted RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 TRIP10Q15642 601 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 OTOAQ7RTW8 1153 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 SPATA2LQ8IUW3 424 aaPredicted RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 WDR49Q8IV35 697 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 BRSK2Q8IWQ3 736 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 KCTD17Q8N5Z5 321 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 POU5F2Q8N7G0 328 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 CDC26Q8NHZ8 85 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 LPPQ93052 612 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 RMDN1Q96DB5 314 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 TMEM120AQ9BXJ8 343 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 RSAD1Q9HA92 442 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 ANLNQ9NQW6 1124 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 MAP3K20Q9NYL2 800 aaKnown RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 GTSE1Q9NYZ3 720 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 PSMC3IPQ9P2W1 217 aaPredicted RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 PCDHA3Q9Y5H8 950 aa6.71□□□□□ -1.34
HMG20A-201ENST00000336216 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.71□□□□□ -1.34
HMG20A-201ENST00000336216 MYH1P12882 1939 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms