RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 LAYNQ6UX15 382 aa13.45□□□□□ -0.26
VSTM4-202ENST00000332853 STRA8Q7Z7C7 330 aa13.45□□□□□ -0.26
VSTM4-202ENST00000332853 ARHGAP18Q8N392 663 aa13.45□□□□□ -0.26
VSTM4-202ENST00000332853 VCPIP1Q96JH7 1222 aa13.45□□□□□ -0.26
VSTM4-202ENST00000332853 ASMTLO95671 621 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 RABGAP1LQ5R372 815 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 SEMA4DQ92854 862 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 DYRK4Q9NR20 520 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 NSMCE4AQ9NXX6 385 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 ANGPT2O15123 496 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 SETSIPP0DME0 302 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 DNAJB2P25686 324 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 PTRHD1Q6GMV3 140 aaKnown RBP13.44□□□□□ -0.26
VSTM4-202ENST00000332853 OVOS1Q6IE37 1185 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 LLGL2Q6P1M3 1020 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 ZNF410Q86VK4 478 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 AVENQ9NQS1 362 aaPredicted RBP13.44□□□□□ -0.26
VSTM4-202ENST00000332853 CHST12Q9NRB3 414 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 NPM3O75607 178 aaKnown RBP13.44□□□□□ -0.26
VSTM4-202ENST00000332853 CYP1A2P05177 515 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 ICA1LQ8NDH6 482 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 CALML6Q8TD86 181 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 TINF2Q9BSI4 451 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 NT5MQ9NPB1 228 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 XPNPEP3Q9NQH7 507 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 F5H5T6 163 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 SHBGP04278 402 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 GEMP55040 296 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 SLC6A3Q01959 620 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 CDH18Q13634 790 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 SGO1Q5FBB7 561 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 CARNMT1Q8N4J0 409 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 CDT1Q9H211 546 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 NCF1BA6NI72 391 aaPredicted RBP13.44□□□□□ -0.26
VSTM4-202ENST00000332853 NCF1CA8MVU1 366 aaPredicted RBP13.44□□□□□ -0.26
VSTM4-202ENST00000332853 PAEPP09466 180 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 NCF1P14598 390 aaPredicted RBP13.44□□□□□ -0.26
VSTM4-202ENST00000332853 MLH1P40692 756 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 BMT2Q1RMZ1 405 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 AGGF1Q8N302 714 aaeCLIP13.44□□□□□ -0.26
VSTM4-202ENST00000332853 PCSK9Q8NBP7 692 aaKnown RBP13.44□□□□□ -0.26
VSTM4-202ENST00000332853 C3orf20Q8ND61 904 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 BSNDQ8WZ55 320 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 GAD1Q99259 594 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 PKP3Q9Y446 797 aa13.44□□□□□ -0.26
VSTM4-202ENST00000332853 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 EIF4BP23588 611 aaKnown RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 ZNF177Q13360 481 aaPredicted RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 TMEM106CQ9BVX2 250 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 CYP4F12Q9HCS2 524 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 PRPF4O43172 522 aaKnown RBP eCLIP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 FBXO21O94952 628 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 SMIM10L2AP0DMW4 78 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 SMIM10L2BP0DMW5 78 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 AKR1A1P14550 325 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 TTMPQ5BVD1 217 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 FAM183BPQ6ZVS7 135 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 SKAP2O75563 359 aaPredicted RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 F9P00740 461 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 BDNFP23560 247 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 AARSP49588 968 aaKnown RBP eCLIP13.43□□□□□ -0.265e-7■■■■■ 27.5
VSTM4-202ENST00000332853 CORO7P57737 925 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 CXCL17Q6UXB2 119 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 IFNEQ86WN2 208 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 NSL1Q96IY1 281 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 FRMD8Q9BZ67 464 aaPredicted RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 SLC4A7Q9Y6M7 1214 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 STK25O00506 426 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 SPTLC1O15269 473 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 MBL2P11226 248 aaPredicted RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 SLC11A2P49281 568 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 MAPRE2Q15555 327 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 SYTL3Q4VX76 610 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 IQSEC1Q6DN90 963 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 SLC9A9Q8IVB4 645 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 AAR2Q9Y312 384 aaKnown RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 TRADDQ15628 312 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 NLRP9Q7RTR0 991 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 GPR142Q7Z601 462 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 PWWP2AQ96N64 755 aa13.43□□□□□ -0.26
VSTM4-202ENST00000332853 MRPL40Q9NQ50 206 aaKnown RBP13.43□□□□□ -0.26
VSTM4-202ENST00000332853 COL1A1P02452 1464 aaPredicted RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 KCNK1O00180 336 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 CLK2P49760 499 aaKnown RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 RPL7AP62424 266 aaKnown RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 PTK6Q13882 451 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 POU6F1Q14863 301 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 EEF1DP3Q658K8 133 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 FOXR1Q6PIV2 292 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 C12orf29Q8N999 325 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 TMEM169Q96HH4 297 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 THEGQ9P2T0 379 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 NID2Q14112 1375 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 IGKV6D-41A0A0C4DH26 115 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms