RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 IL1RAPL1Q9NZN1 696 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 SEPT10Q9P0V9 454 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 CNTNAP1P78357 1384 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 RBBP6Q7Z6E9 1792 aaKnown RBP9.05□□□□□ -0.96
LIMK2-201ENST00000331728 DLDP09622 509 aaKnown RBP9.05□□□□□ -0.96
LIMK2-201ENST00000331728 IGBP1P78318 339 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 PRKD1Q15139 912 aaPredicted RBP9.05□□□□□ -0.96
LIMK2-201ENST00000331728 MAP3K21Q5TCX8 1036 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 ATF7IP2Q5U623 682 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 ZNF276Q8N554 614 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 NIPA2Q8N8Q9 360 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 AGBL3Q8NEM8 1001 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 SHCBP1LQ9BZQ2 653 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 TMEM134Q9H6X4 195 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 KCNK13Q9HB14 408 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 MYOZ2Q9NPC6 264 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 DDX43Q9NXZ2 648 aaKnown RBP9.05□□□□□ -0.96
LIMK2-201ENST00000331728 TJP2Q9UDY2 1190 aa9.05□□□□□ -0.96
LIMK2-201ENST00000331728 COL2A1P02458 1487 aaPredicted RBP9.05□□□□□ -0.96
LIMK2-201ENST00000331728 CHADO15335 359 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 GARSP41250 739 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 RANBP1P43487 201 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 HIRAP54198 1017 aaPredicted RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 SH3BGRP55822 239 aaPredicted RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 ASPHQ12797 758 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 CNPY1Q3B7I2 92 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 CCDC14Q49A88 953 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 NCAPG2Q86XI2 1143 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 ZNF280CQ8ND82 737 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 RBM15BQ8NDT2 890 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 PPP2R3CQ969Q6 453 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 CPXM1Q96SM3 734 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 DHX35Q9H5Z1 703 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 XAB2Q9HCS7 855 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 DNAJC16Q9Y2G8 782 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 A0A1B0GVG6 124 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 TRUB2O95900 331 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 APOEP02649 317 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 ITGB3P05106 788 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 RBL1P28749 1068 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 BACE1P56817 501 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 RPL10AP62906 217 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 TAF5Q15542 800 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 RABGAP1LQ5R372 815 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 FAM182AQ5T1J6 154 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 IER5Q5VY09 327 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 HEATR6Q6AI08 1181 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 TUBGCP5Q96RT8 1024 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 DHRS4Q9BTZ2 278 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 DHX33Q9H6R0 707 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 PCDHGC3Q9UN70 934 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 TELO2Q9Y4R8 837 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 SLC4A7Q9Y6M7 1214 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 KAT6AQ92794 2004 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 MICAL2O94851 1124 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 KLHL2O95198 593 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 SESN2P58004 480 aaPredicted RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 CLDN10P78369 228 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 SLC25A11Q02978 314 aaKnown RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 MXD4Q14582 209 aaPredicted RBP9.04□□□□□ -0.96
LIMK2-201ENST00000331728 NOMO1Q15155 1222 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 LIN52Q52LA3 116 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 FAM91A1Q658Y4 838 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 MPZL3Q6UWV2 235 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 RSPH3Q86UC2 560 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 TRIM50Q86XT4 487 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 ULK2Q8IYT8 1036 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 POU5F2Q8N7G0 328 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 FAM81AQ8TBF8 368 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 FNIP1Q8TF40 1166 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 MZB1Q8WU39 189 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 CLPTM1LQ96KA5 538 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 SPATA16Q9BXB7 569 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 FAM96AQ9H5X1 160 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 STK32BQ9NY57 414 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 SOX13Q9UN79 622 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 STYXL1Q9Y6J8 313 aa9.04□□□□□ -0.96
LIMK2-201ENST00000331728 PIGRP01833 764 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 ERBB2P04626 1255 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 CXCL8P10145 99 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 CDK7P50613 346 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 ZNF132P52740 706 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 COPAP53621 1224 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 YWHAZP63104 245 aaKnown RBP9.03□□□□□ -0.96
LIMK2-201ENST00000331728 MED21Q13503 144 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 MAP7Q14244 749 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 TRIP10Q15642 601 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 C15orf59Q2T9L4 293 aaPredicted RBP9.03□□□□□ -0.96
LIMK2-201ENST00000331728 EFHC1Q5JVL4 640 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 IGDCC3Q8IVU1 814 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 CCDC33Q8N5R6 958 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 GSDMBQ8TAX9 411 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 OPTNQ96CV9 577 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 NDNQ99608 321 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 GCOM2Q9BZD3 368 aaPredicted RBP9.03□□□□□ -0.96
LIMK2-201ENST00000331728 PLLPQ9Y342 182 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 CNTNAP2Q9UHC6 1331 aa9.03□□□□□ -0.96
LIMK2-201ENST00000331728 MYH9P35579 1960 aaKnown RBP9.03□□□□□ -0.96
LIMK2-201ENST00000331728 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms