RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SLC29A2Q14542 456 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 CRYMQ14894 314 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 EMC1Q8N766 993 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 FAM172AQ8WUF8 416 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 PRMT7Q9NVM4 692 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 GRID1Q9ULK0 1009 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 SNX12Q9UMY4 172 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 PSMA4P25789 261 aaKnown RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 KLRC1P26715 233 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 SARSP49591 514 aaKnown RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 HLA-DQA1Q5Y7H0 255 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 NAPEPLDQ6IQ20 393 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 DNAJC14Q6Y2X3 702 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 BARGINQ6ZT62 677 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 STOX1Q6ZVD7 989 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 ZDHHC6Q9H6R6 413 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 SYBUQ9NX95 663 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 DDX43Q9NXZ2 648 aaKnown RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 GALNT8Q9NY28 637 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 LBPP18428 481 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 PSMC6P62333 389 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 SFSWAPQ12872 951 aaKnown RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 AASDHQ4L235 1098 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 PLEKHH3Q7Z736 793 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 FAM124AQ86V42 546 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 USP15Q9Y4E8 981 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 OR1E1P30953 314 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 FGD3Q5JSP0 725 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 LRRC74BQ6ZQY2 392 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 PARGQ86W56 976 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 ARID3BQ8IVW6 561 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 GFM2Q969S9 779 aaKnown RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 RSAD1Q9HA92 442 aa10.88□□□□□ -0.67
CLN8-201ENST00000331222 GBA2Q9HCG7 927 aaPredicted RBP10.88□□□□□ -0.67
CLN8-201ENST00000331222 SAMD9LQ8IVG5 1584 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 OVOS2A0A0G2JMS6 1433 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 OVOS2A0A0J9YW53 1432 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 OVOS2Q6IE36 1432 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 LRRC14BA6NHZ5 514 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 O00370 1275 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 TP73O15350 636 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 SOX6P35712 828 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 CUL2Q13617 745 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 CCNIQ14094 377 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 PTGISQ16647 500 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 NEK10Q6ZWH5 1172 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 ACER1Q8TDN7 264 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 EPS8L3Q8TE67 593 aaKnown RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 WDR35Q9P2L0 1181 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 AP4E1Q9UPM8 1137 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 GPSM3Q9Y4H4 160 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 KPNA3O00505 521 aaPredicted RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 RFC5P40937 340 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 EIF2B5Q13144 721 aaKnown RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 NCF4Q15080 339 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 PRAMEF19Q5SWL8 479 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 AHI1Q8N157 1196 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 BBS4Q96RK4 519 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 PDGFCQ9NRA1 345 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 NMRK1Q9NWW6 199 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 ALKBH4Q9NXW9 302 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 ZNHIT2Q9UHR6 403 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 HAO1Q9UJM8 370 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 CRYL1Q9Y2S2 319 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 SNX13Q9Y5W8 968 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 SERPINB1P30740 379 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 SERPINB9P50453 376 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 PLK1P53350 603 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 KIAA1324Q6UXG2 1013 aaKnown RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 BRSK2Q8IWQ3 736 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 CASP10Q92851 521 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 JMJD4Q9H9V9 463 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 ZNF304Q9HCX3 659 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 VTA1Q9NP79 307 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 TRPM5Q9NZQ8 1165 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 USP18Q9UMW8 372 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 NCAPD2Q15021 1401 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 FAM86B1E9PN63 330 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 ANXA9O76027 345 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 SLC25A27O95847 323 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 GEMIN4P57678 1058 aaKnown RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 ADIGQ0VDE8 80 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 NR6A1Q15406 480 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 LINC00523Q86TU6 105 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 TDRD5Q8NAT2 981 aaKnown RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 C19orf18Q8NEA5 215 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 RBBP8Q99708 897 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 ADGRE3Q9BY15 652 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 TEX28O15482 410 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 FAM86B2P0C5J1 330 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 ZCCHC18P0CG32 403 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 OTUD4Q01804 1114 aaKnown RBP10.87□□□□□ -0.67
CLN8-201ENST00000331222 TKFCQ3LXA3 575 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 C3orf67Q6ZVT6 689 aa10.87□□□□□ -0.67
CLN8-201ENST00000331222 EFL1Q7Z2Z2 1120 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms