RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 NUF2Q9BZD4 464 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 DAGLAQ9Y4D2 1042 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 CNTNAP2Q9UHC6 1331 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 A0A0B4J269 797 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 GIPC1O14908 333 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 HLA-DOAP06340 250 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 THRAP10827 490 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 PSMC1P62191 440 aaKnown RBP21.32■■□□□ 1
CMTM4-201ENST00000330687 POTEHQ6S545 545 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 JADE3Q92613 823 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 PPWD1Q96BP3 646 aaKnown RBP21.32■■□□□ 1
CMTM4-201ENST00000330687 RNPEPQ9H4A4 650 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 TUFT1Q9NNX1 390 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 SSU72Q9NP77 194 aaKnown RBP21.32■■□□□ 1
CMTM4-201ENST00000330687 SLC9A2Q9UBY0 812 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 TRIM17Q9Y577 477 aa21.32■■□□□ 1
CMTM4-201ENST00000330687 STX16-NPEPL1H3BU86 382 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 J3QRK9 145 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 GPSM2P81274 684 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 SEPT6Q14141 434 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 MYO1HQ8N1T3 1032 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 FBXW8Q8N3Y1 598 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 PIWIL2Q8TC59 973 aaKnown RBP21.31■■□□□ 1
CMTM4-201ENST00000330687 FBXL8Q96CD0 374 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 MOCOSQ96EN8 888 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 TMA16Q96EY4 203 aaKnown RBP21.31■■□□□ 1
CMTM4-201ENST00000330687 PPCSQ9HAB8 311 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 TMEM8AQ9HCN3 771 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 IP6K2Q9UHH9 426 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 SNCAIPQ9Y6H5 919 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 F7P08709 466 aaPredicted RBP21.31■■□□□ 1
CMTM4-201ENST00000330687 DHRS4L1P0CG22 281 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 PCGF5Q86SE9 256 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 EMC1Q8N766 993 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 BHLHE22Q8NFJ8 381 aaPredicted RBP21.31■■□□□ 1
CMTM4-201ENST00000330687 TBC1D23Q9NUY8 699 aa21.31■■□□□ 1
CMTM4-201ENST00000330687 hCG_1818297A0A087WSY0 165 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 E2F6O75461 281 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 KLHL2O95198 593 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 ACOT2P49753 483 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 MRPS5P82675 430 aaKnown RBP21.3■■□□□ 1
CMTM4-201ENST00000330687 XKR9Q5GH70 373 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 TATDN1Q6P1N9 297 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 TPTE2Q6XPS3 522 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 TMEM110Q86TL2 294 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 SPATA18Q8TC71 538 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 CMTM5Q96DZ9 223 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 MARK4Q96L34 752 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 P4HA2O15460 535 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 FOSP01100 380 aaPredicted RBP21.3■■□□□ 1
CMTM4-201ENST00000330687 SLC1A6P48664 564 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 CD97P48960 835 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 KCTD6Q8NC69 237 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 C7orf26Q96N11 449 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 BTBD9Q96Q07 612 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 TRPV6Q9H1D0 765 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 PARVAQ9NVD7 372 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 SPATA7Q9P0W8 599 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 MAGED2Q9UNF1 606 aaPredicted RBP21.3■■□□□ 1
CMTM4-201ENST00000330687 WDR37Q9Y2I8 494 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 FBP2O00757 339 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 KCNQ2O43526 872 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 PSMA2P25787 234 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 SEZ6Q53EL9 994 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 AVENQ9NQS1 362 aaPredicted RBP21.3■■□□□ 1
CMTM4-201ENST00000330687 FAIMQ9NVQ4 179 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 ARHGAP26Q9UNA1 814 aa21.3■■□□□ 1
CMTM4-201ENST00000330687 ARHGEF37A1IGU5 675 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 TMEM247A6NEH6 219 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 SDR42E2A6NKP2 422 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 NFIAQ12857 509 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 PPM1LQ5SGD2 360 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 MON1BQ7L1V2 547 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 TFB1MQ8WVM0 346 aaKnown RBP21.29■■□□□ 1
CMTM4-201ENST00000330687 KCNK16Q96T55 309 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 TMEM79Q9BSE2 394 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 EBF1Q9UH73 591 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 PSMD13Q9UNM6 376 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 DLEC1Q9Y238 1755 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 SF3B1O75533 1304 aaKnown RBP eCLIP21.29■■□□□ 1
CMTM4-201ENST00000330687 MCF2LO15068 1137 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 SHMT1P34896 483 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 SLC15A2Q16348 729 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 TRMT10BQ6PF06 316 aaKnown RBP21.29■■□□□ 1
CMTM4-201ENST00000330687 NAT8LQ8N9F0 302 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 DEPDC1BQ8WUY9 529 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 COQ6Q9Y2Z9 468 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 CEPT1Q9Y6K0 416 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 SCINQ9Y6U3 715 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 XRCC1P18887 633 aaPredicted RBP21.29■■□□□ 1
CMTM4-201ENST00000330687 MX2P20592 715 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 CD300CQ08708 224 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 CEP55Q53EZ4 464 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 SLC9A9Q8IVB4 645 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 TTLL6Q8N841 843 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 DDI1Q8WTU0 396 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 MKL1Q969V6 931 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 PKP2Q99959 881 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 TEKT3Q9BXF9 490 aa21.29■■□□□ 1
CMTM4-201ENST00000330687 G3V3G9 751 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms