RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PDE6CP51160 858 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 NDUFA8P51970 172 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 GPC5P78333 572 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 STK4Q13043 487 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 SNW1Q13573 536 aaKnown RBP6.76□□□□□ -1.33
SMG1-201ENST00000330588 ZNF528Q3MIS6 628 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 MGAT5BQ3V5L5 792 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 ARHGAP29Q52LW3 1261 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 GAREM2Q75VX8 874 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 LRRTM3Q86VH5 581 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 OR5B17Q8NGF7 314 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 SPATA20Q8TB22 786 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 KBTBD7Q8WVZ9 684 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 ING5Q8WYH8 240 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 HPS3Q969F9 1004 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 MCRS1Q96EZ8 462 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 PGLYRP2Q96PD5 576 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 GSDMAQ96QA5 445 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 TMEM209Q96SK2 561 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 KXD1Q9BQD3 176 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 XYLT2Q9H1B5 865 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 BLZF1Q9H2G9 400 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 C8orf33Q9H7E9 229 aaPredicted RBP6.76□□□□□ -1.33
SMG1-201ENST00000330588 AKTIPQ9H8T0 292 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 RMND1Q9NWS8 449 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 FBXO4Q9UKT5 387 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 FRMD4BQ9Y2L6 1034 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 SIT1Q9Y3P8 196 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 SNX9Q9Y5X1 595 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 PATJQ8NI35 1801 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 PTPRDP23468 1912 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 BDP1A6H8Y1 2624 aa6.76□□□□□ -1.33
SMG1-201ENST00000330588 OBSL1O75147 1896 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 NCANO14594 1321 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 DOCK6Q96HP0 2047 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 F8W735 103 aaPredicted RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 ARNTLO00327 626 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 MMP20O60882 483 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 C4BPAP04003 597 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 NR3C1P04150 777 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 P4HA1P13674 534 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 HMGA1P17096 107 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 PTMSP20962 102 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 GTF2H1P32780 548 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 CYP2J2P51589 502 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 NLRP12P59046 1061 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 TNNC1P63316 161 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 NOP14P78316 857 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 TEAD2Q15562 447 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 ZACNQ401N2 412 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 ZCWPW2Q504Y3 356 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 TANGO2Q6ICL3 276 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 ZC3H14Q6PJT7 736 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 VITQ6UXI7 678 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 ZNF852Q6ZMS4 543 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 INTS8Q75QN2 995 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 SPATA2LQ8IUW3 424 aaPredicted RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 NELFCDQ8IXH7 590 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 TTC9BQ8N6N2 239 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 CELF5Q8N6W0 485 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 FSIP1Q8NA03 581 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 ZSCAN18Q8TBC5 510 aaPredicted RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 MYCBPAPQ8TBZ2 947 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 OVCA2Q8WZ82 227 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 C8orf48Q96LL4 319 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 SEPT5Q99719 369 aaPredicted RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 DUSP9Q99956 384 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 SYT15Q9BQS2 421 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 RPP25Q9BUL9 199 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 TTLL2Q9BWV7 592 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 FAM126AQ9BYI3 521 aaPredicted RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 MRPL18Q9H0U6 180 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 ZNF334Q9HCZ1 680 aaPredicted RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 LTB4R2Q9NPC1 389 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 COMMD8Q9NX08 183 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 ABI2Q9NYB9 513 aaPredicted RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 HOOK1Q9UJC3 728 aaKnown RBP6.75□□□□□ -1.33
SMG1-201ENST00000330588 MIA3Q5JRA6 1907 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 ATP8B3O60423 1300 aa6.75□□□□□ -1.33
SMG1-201ENST00000330588 XIRP2A4UGR9 3374 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 HEPACAM2A8MVW5 462 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 J3QW42 95 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ZNF263O14978 683 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CLIC2O15247 247 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 STX10O60499 249 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 PAPSS2O95340 614 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 DLATP10515 647 aaKnown RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 TRIM21P19474 475 aaKnown RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 GABRR2P28476 465 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CASP1P29466 404 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 MRE11P49959 708 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 FAM160A1Q05DH4 1040 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 TRPC3Q13507 836 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 SETDB1Q15047 1291 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 TAF12Q16514 161 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 SGSM1Q2NKQ1 1148 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 MON1AQ86VX9 555 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 UNC93AQ86WB7 457 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 OSTM1Q86WC4 334 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 RALGPS2Q86X27 583 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms