RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 DAB1O75553 588 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 ZNF23P17027 643 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 GRK2P25098 689 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 RBL1P28749 1068 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 GALK1P51570 392 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 SNRPFP62306 86 aaKnown RBP14.5□□□□□ -0.09
EPHB3-201ENST00000330394 ACSBG2Q5FVE4 666 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 CCDC81Q6ZN84 652 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 FAM43BQ6ZT52 329 aaPredicted RBP14.5□□□□□ -0.09
EPHB3-201ENST00000330394 PCDH20Q8N6Y1 951 aaKnown RBP14.5□□□□□ -0.09
EPHB3-201ENST00000330394 PHACTR1Q9C0D0 580 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 RNPEPQ9H4A4 650 aa14.5□□□□□ -0.09
EPHB3-201ENST00000330394 SUPT7LO94864 414 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 SERPINE1P05121 402 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 ALDH1A3P47895 512 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 HSPA13P48723 471 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 STX5Q13190 355 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 CCDC117Q8IWD4 279 aaPredicted RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 RNF139Q8WU17 664 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 MARK4Q96L34 752 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 NT5C1AQ9BXI3 368 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 FRMD8Q9BZ67 464 aaPredicted RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 NRDE2Q9H7Z3 1164 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 PTPRHQ9HD43 1115 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 MIPP30301 263 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 LIN52Q52LA3 116 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 DCAF12L1Q5VU92 463 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 DENND1BQ6P3S1 775 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 QTRT2Q9H974 415 aaKnown RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 TAS2R1Q9NYW7 299 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 RUVBL2Q9Y230 463 aaKnown RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 ATRNO75882 1429 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 WDR27A2RRH5 827 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 PPP1R11O60927 126 aaPredicted RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 ZC3H11AO75152 810 aaKnown RBP eCLIP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 ALBP02768 609 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 NFKBIAP25963 317 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 CACNB2Q08289 660 aaPredicted RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 OTUD3Q5T2D3 398 aaPredicted RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 RC3H1Q5TC82 1133 aaKnown RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 ANO7Q6IWH7 933 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 SLFN11Q7Z7L1 901 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 RMND5BQ96G75 393 aaPredicted RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 SLITRK1Q96PX8 696 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 C2orf40Q9H1Z8 148 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 ANKRD26Q9UPS8 1709 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 LIN7AO14910 233 aaPredicted RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 SNX2O60749 519 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 TBX10O75333 385 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 FAM155BO75949 473 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 GARTP22102 1010 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 HADHAP40939 763 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 RPS6KA3P51812 740 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 TSPY1Q01534 308 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 UTS2BQ765I0 119 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 TMCO5AQ8N6Q1 288 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 TFB1MQ8WVM0 346 aaKnown RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 ATG4CQ96DT6 458 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 PRMT6Q96LA8 375 aaPredicted RBP14.49□□□□□ -0.09
EPHB3-201ENST00000330394 COMMD3-BMI1R4GMX3 469 aa14.49□□□□□ -0.09
EPHB3-201ENST00000330394 PEX11AO75192 247 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 DEAF1O75398 565 aaPredicted RBP14.48□□□□□ -0.09
EPHB3-201ENST00000330394 WFS1O76024 890 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 CHRNA5P30532 468 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 CCNFP41002 786 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 GOLGA7BQ2TAP0 167 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 PRAMEF18Q5VWM3 479 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 LRRC8BQ6P9F7 803 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 HPDLQ96IR7 371 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 FAM167AQ96KS9 214 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ZBTB18Q99592 522 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ACSS3Q9H6R3 686 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ACAD9Q9H845 621 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 STK32BQ9NY57 414 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 SCHIP1Q9P0W5 487 aaPredicted RBP14.48□□□□□ -0.09
EPHB3-201ENST00000330394 CYB561D2O14569 222 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 TPH1P17752 444 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 NEK2P51955 445 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ARHGDIAP52565 204 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ARPP19P56211 112 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 SHROOM1Q2M3G4 852 aaPredicted RBP14.48□□□□□ -0.09
EPHB3-201ENST00000330394 RINLQ6ZS11 566 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 NET1Q7Z628 596 aaPredicted RBP14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ACOT1Q86TX2 421 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 WDR18Q9BV38 432 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 IARS2Q9NSE4 1012 aaKnown RBP14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ARHGEF38Q9NXL2 777 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 CPSF3Q9UKF6 684 aaKnown RBP14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ADGRA3Q8IWK6 1321 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 TCRBV9S1A1TA0A576 114 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 KCNK1O00180 336 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ALOX15BO15296 676 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 PMPCBO75439 489 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 FGRP09769 529 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 AMPD1P23109 780 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 ME2P23368 584 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 GLRA4Q5JXX5 417 aa14.48□□□□□ -0.09
EPHB3-201ENST00000330394 SPDYAQ5MJ70 313 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms