RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 SYKP43405 635 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 KIR2DL1P43626 348 aaPredicted RBP24.62■■□□□ 1.53
TMEM54-201ENST00000329151 KRT85P78386 507 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 LMAN2Q12907 356 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 SPOPLQ6IQ16 392 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 INTS8Q75QN2 995 aaKnown RBP24.62■■□□□ 1.53
TMEM54-201ENST00000329151 TADA2BQ86TJ2 420 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 SFTPA1Q8IWL2 248 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 TMEM174Q8WUU8 243 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 CCDC34Q96HJ3 373 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 ZFRQ96KR1 1074 aaKnown RBP24.62■■□□□ 1.53
TMEM54-201ENST00000329151 NT5C1AQ9BXI3 368 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 MMRN2Q9H8L6 949 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 ZDHHC4Q9NPG8 344 aa24.62■■□□□ 1.53
TMEM54-201ENST00000329151 CEP192Q8TEP8 1941 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 A0A0A0MRY4 1105 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 FAM92AA1XBS5 289 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 NEDD8-MDP1E9PL57 170 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 ZDHHC11BP0C7U3 371 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 NR2F2P24468 414 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 P2RY2P41231 377 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 UAP1L1Q3KQV9 507 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 TMEM25Q86YD3 366 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 C12orf29Q8N999 325 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 TERB1Q8NA31 727 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 BBS2Q9BXC9 721 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 CSNK1G1Q9HCP0 422 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 WDR35Q9P2L0 1181 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 HMGXB4Q9UGU5 601 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 PCDHA5Q9Y5H7 936 aa24.61■■□□□ 1.53
TMEM54-201ENST00000329151 KMT2BQ9UMN6 2715 aaPredicted RBP24.6■■□□□ 1.53
TMEM54-201ENST00000329151 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 ANTXRLA6NF34 631 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 HOXB2P14652 356 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 ACO1P21399 889 aaKnown RBP24.6■■□□□ 1.53
TMEM54-201ENST00000329151 PMLP29590 882 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 ASPAP45381 313 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 MESP2Q0VG99 397 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 PKP1Q13835 747 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 TRIM61Q5EBN2 209 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 LYSMD4Q5XG99 296 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 TMEFF1Q8IYR6 380 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 OLIG1Q8TAK6 271 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 CYFIP2Q96F07 1278 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 DUSP9Q99956 384 aaKnown RBP24.6■■□□□ 1.53
TMEM54-201ENST00000329151 CYP3A43Q9HB55 503 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 SCML2Q9UQR0 700 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 PLXND1Q9Y4D7 1925 aa24.6■■□□□ 1.53
TMEM54-201ENST00000329151 MAPK13O15264 365 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 AP5Z1O43299 807 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 BEST1O76090 585 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 HNRNPLP14866 589 aaKnown RBP eCLIP24.59■■□□□ 1.53
TMEM54-201ENST00000329151 CD58P19256 250 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 GCLMP48507 274 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 ATXN3P54252 364 aaPredicted RBP24.59■■□□□ 1.53
TMEM54-201ENST00000329151 C10orf120Q5SQS8 335 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 SLC36A4Q6YBV0 504 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 TPGS1Q6ZTW0 290 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 HTR3DQ70Z44 454 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 SYT12Q8IV01 421 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 ETFBKMTQ8IXQ9 262 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 FAM186BQ8IYM0 893 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 CHPFQ8IZ52 775 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 ZMIZ2Q8NF64 920 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 NIF3L1Q9GZT8 377 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 TRAF3IP3Q9Y228 551 aa24.59■■□□□ 1.53
TMEM54-201ENST00000329151 PATE3B3GLJ2 98 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 CYP26A1O43174 497 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 KRT37O76014 449 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 TBX18O95935 607 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 RARGP13631 454 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 NTSR1P30989 418 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 WASP42768 502 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 RPL6Q02878 288 aaKnown RBP24.58■■□□□ 1.53
TMEM54-201ENST00000329151 SPDYCQ5MJ68 293 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 HNRNPABQ99729 332 aaKnown RBP24.58■■□□□ 1.53
TMEM54-201ENST00000329151 DNMT3LQ9UJW3 386 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 NAGPAQ9UK23 515 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 ATP6V1DQ9Y5K8 247 aa24.58■■□□□ 1.53
TMEM54-201ENST00000329151 ADAM23O75077 832 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 TRIM49P0CI25 452 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 TRIM49CP0CI26 452 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 RALAP11233 206 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 TYRP14679 529 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 PSMC2P35998 433 aaKnown RBP24.57■■□□□ 1.52
TMEM54-201ENST00000329151 PLA2G4AP47712 749 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 PSEN1P49768 467 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 IRX4P78413 519 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 ZNF252P-AS1Q0IIN9 211 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 INCA1Q0VD86 236 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 SH3PXD2AQ5TCZ1 1133 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 CLEC20AQ6ZU45 233 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 PHTF2Q8N3S3 785 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 CDK5RAP1Q96SZ6 601 aaKnown RBP24.57■■□□□ 1.52
TMEM54-201ENST00000329151 KLF16Q9BXK1 252 aaPredicted RBP24.57■■□□□ 1.52
TMEM54-201ENST00000329151 PNPLA8Q9NP80 782 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 CYLDQ9NQC7 956 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 EVLQ9UI08 416 aaPredicted RBP24.57■■□□□ 1.52
TMEM54-201ENST00000329151 MAPK8IP1Q9UQF2 711 aa24.57■■□□□ 1.52
TMEM54-201ENST00000329151 ASCC3Q8N3C0 2202 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms