RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 THAP1Q9NVV9 213 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 PLA2G4CQ9UP65 541 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 SCAF8Q9UPN6 1271 aaKnown RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 ADGRA2Q96PE1 1338 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 VWA5AO00534 786 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 CRABP2P29373 138 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 ARL2P36404 184 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 MED21Q13503 144 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 TMCO4Q5TGY1 634 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 GSTCDQ8NEC7 633 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 RAB3IL1Q8TBN0 382 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 DEPDC1BQ8WUY9 529 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 CCDC106Q9BWC9 280 aa15.16■□□□□ 0.02
SSBP3-201ENST00000326956 XAB2Q9HCS7 855 aaKnown RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 DMAP1Q9NPF5 467 aaPredicted RBP15.16■□□□□ 0.02
SSBP3-201ENST00000326956 ADCY3O60266 1144 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 BPGMP07738 259 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 MRPS5P82675 430 aaKnown RBP15.15■□□□□ 0.02
SSBP3-201ENST00000326956 WASHC5Q12768 1159 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 ACAP1Q15027 740 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 CDO1Q16878 200 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 SCYL2Q6P3W7 929 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 XYLT1Q86Y38 959 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 STKLD1Q8NE28 680 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 C1orf21Q9H246 121 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 SORCS3Q9UPU3 1222 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 RGPD3A6NKT7 1758 aaPredicted RBP15.15■□□□□ 0.02
SSBP3-201ENST00000326956 RGPD4Q7Z3J3 1758 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 OGTO15294 1046 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 RFPL1O75677 317 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 RGS20O76081 388 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 C6orf222P0C671 652 aaPredicted RBP15.15■□□□□ 0.02
SSBP3-201ENST00000326956 RAP1GAPP47736 663 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 HIRAP54198 1017 aaPredicted RBP15.15■□□□□ 0.02
SSBP3-201ENST00000326956 BCAR1P56945 870 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 OSTNP61366 133 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 SLC25A3Q00325 362 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 CDK18Q07002 472 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 ORC1Q13415 861 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 LAMB3Q13751 1172 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 ZNF667Q5HYK9 610 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 AAGABQ6PD74 315 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 ZPBP2Q6X784 338 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 KYAT3Q6YP21 454 aaKnown RBP15.15■□□□□ 0.02
SSBP3-201ENST00000326956 OR6Y1Q8NGX8 325 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 PYDC1Q8WXC3 89 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 CYTH4Q9UIA0 394 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 EP400Q96L91 3159 aa15.15■□□□□ 0.02
SSBP3-201ENST00000326956 TXNDC9O14530 226 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 BIRC5O15392 142 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 KLHL2O95198 593 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 ERBB2P04626 1255 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 EDN1P05305 212 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 SERPINB6P35237 376 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 SERPINB9P50453 376 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 LIN52Q52LA3 116 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 PPP4R1Q8TF05 950 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 EBF4Q9BQW3 602 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 POPDC2Q9HBU9 364 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 NRBP2Q9NSY0 501 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
SSBP3-201ENST00000326956 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.14■□□□□ 0.01
SSBP3-201ENST00000326956 UGT1A9O60656 530 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 CRHR1P34998 444 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 CDK7P50613 346 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 GRM1Q13255 1194 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 CAPSQ13938 189 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 HSF5Q4G112 596 aaPredicted RBP15.14■□□□□ 0.01
SSBP3-201ENST00000326956 ARCQ7LC44 396 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 DHDDSQ86SQ9 333 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 RNF217Q8TC41 542 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 ATP2A3Q93084 1043 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 CCDC124Q96CT7 223 aaKnown RBP15.14■□□□□ 0.01
SSBP3-201ENST00000326956 UGT1A7Q9HAW7 530 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 UGT1A10Q9HAW8 530 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 UGT1A8Q9HAW9 530 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 S100A14Q9HCY8 104 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 DNAJC16Q9Y2G8 782 aa15.14■□□□□ 0.01
SSBP3-201ENST00000326956 M0QYV0 167 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 SRGAP2CP0DJJ0 459 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 PDGFRAP16234 1089 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 PRKCHP24723 683 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 RBL1P28749 1068 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 CCNFP41002 786 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 EFNA5P52803 228 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 COPAP53621 1224 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 CNPY1Q3B7I2 92 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 TEX44Q53QW1 395 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 FASTKD1Q53R41 847 aaKnown RBP15.13■□□□□ 0.01
SSBP3-201ENST00000326956 RAPH1Q70E73 1250 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 EGFL6Q8IUX8 553 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 NME8Q8N427 588 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 POU5F2Q8N7G0 328 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 HIPK4Q8NE63 616 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 FLAD1Q8NFF5 587 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 LRRC39Q96DD0 335 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 SPATA16Q9BXB7 569 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 ZCWPW1Q9H0M4 648 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 EBF3Q9H4W6 596 aa15.13■□□□□ 0.01
SSBP3-201ENST00000326956 CYP4F11Q9HBI6 524 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms