RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 LRRC57Q8N9N7 239 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 MYLPFQ96A32 169 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 TPX2Q9ULW0 747 aaKnown RBP13.67□□□□□ -0.22
LIN28A-202ENST00000326279 AMHP03971 560 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 DCLK2Q8N568 766 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 APOL2Q9BQE5 337 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 CNPY3Q9BT09 278 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 SUDS3Q9H7L9 328 aaPredicted RBP13.67□□□□□ -0.22
LIN28A-202ENST00000326279 KANSL3Q9P2N6 904 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 TSR3Q9UJK0 312 aaKnown RBP13.67□□□□□ -0.22
LIN28A-202ENST00000326279 F5P12259 2224 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 PSTPIP1O43586 416 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 IRAK1P51617 712 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 ANKRD20A3Q5VUR7 823 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 EXD1Q8NHP7 514 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 ATP2A3Q93084 1043 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 BORCS6Q96GS4 357 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 FAM161BQ96MY7 647 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 RPRD1AQ96P16 312 aaPredicted RBP13.67□□□□□ -0.22
LIN28A-202ENST00000326279 PABPC3Q9H361 631 aaKnown RBP13.67□□□□□ -0.22
LIN28A-202ENST00000326279 UBP1Q9NZI7 540 aa13.67□□□□□ -0.22
LIN28A-202ENST00000326279 PTPRZ1P23471 2315 aaPredicted RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 TNS1Q9HBL0 1735 aaKnown RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 O00370 1275 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 LSM8O95777 96 aaKnown RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 CYP1A2P05177 515 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 HOXA11P31270 313 aaPredicted RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 FNTAP49354 379 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 SOX4Q06945 474 aaPredicted RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 PLD1Q13393 1074 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 PCSK7Q16549 785 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 SREK1Q8WXA9 508 aaKnown RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 CDKL2Q92772 493 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 SCYL1Q96KG9 808 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 CDC42EP4Q9H3Q1 356 aaKnown RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 RRP15Q9Y3B9 282 aaKnown RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 MYH7BA7E2Y1 1941 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 LRG1P02750 347 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 FAM183BPQ6ZVS7 135 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 CACUL1Q86Y37 369 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 AENQ8WTP8 325 aaKnown RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 CLEC4CQ8WTT0 213 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 DEPDC1BQ8WUY9 529 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 SNX27Q96L92 541 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 MIOSQ9NXC5 875 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 R3HDM2Q9Y2K5 976 aaKnown RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 FAM155AB1AL88 458 aaPredicted RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 YWHAZP63104 245 aaKnown RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 PTK7Q13308 1070 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 BOLA3Q53S33 107 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 EFHC1Q5JVL4 640 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 PLPP4Q5VZY2 271 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 PMF1Q6P1K2 205 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 CCDC197Q8NCU1 140 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 C3orf20Q8ND61 904 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 RASSF4Q9H2L5 321 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.66□□□□□ -0.22
LIN28A-202ENST00000326279 SFMBT1Q9UHJ3 866 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 SIX4Q9UIU6 781 aa13.66□□□□□ -0.22
LIN28A-202ENST00000326279 CHN1P15882 459 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 NPNTQ6UXI9 565 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 CCDC97Q96F63 343 aaPredicted RBP13.65□□□□□ -0.22
LIN28A-202ENST00000326279 DCLK3Q9C098 648 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 AVENQ9NQS1 362 aaPredicted RBP13.65□□□□□ -0.22
LIN28A-202ENST00000326279 FAM8A1Q9UBU6 413 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 H3BRJ5 948 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 EEF2KO00418 725 aaKnown RBP13.65□□□□□ -0.22
LIN28A-202ENST00000326279 ATXN1P54253 815 aaKnown RBP13.65□□□□□ -0.22
LIN28A-202ENST00000326279 RAD23BP54727 409 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 CAV1Q03135 178 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 C1orf220Q5T0J3 134 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 PRMT1Q99873 361 aaKnown RBP13.65□□□□□ -0.22
LIN28A-202ENST00000326279 GIT1Q9Y2X7 761 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 RREB1Q92766 1687 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 A0A087WUV0 522 aaPredicted RBP13.65□□□□□ -0.22
LIN28A-202ENST00000326279 NDC80O14777 642 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 HOXA2O43364 376 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 TKTP29401 623 aaKnown RBP13.65□□□□□ -0.22
LIN28A-202ENST00000326279 EPHB1P54762 984 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 SOWAHAQ2M3V2 549 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 SERINC5Q86VE9 423 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 BAIAP2L1Q9UHR4 511 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 DCTN4Q9UJW0 460 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 PCDHB5Q9Y5E4 795 aa13.65□□□□□ -0.22
LIN28A-202ENST00000326279 GMNCA6NCL1 334 aa13.64□□□□□ -0.23
LIN28A-202ENST00000326279 KCNK1O00180 336 aa13.64□□□□□ -0.23
LIN28A-202ENST00000326279 MMP8P22894 467 aa13.64□□□□□ -0.23
LIN28A-202ENST00000326279 MDH1P40925 334 aaKnown RBP13.64□□□□□ -0.23
LIN28A-202ENST00000326279 CENPCQ03188 943 aa13.64□□□□□ -0.23
LIN28A-202ENST00000326279 IL31Q6EBC2 164 aa13.64□□□□□ -0.23
LIN28A-202ENST00000326279 ZNF558Q96NG5 402 aa13.64□□□□□ -0.23
LIN28A-202ENST00000326279 G3BP2Q9UN86 482 aaKnown RBP13.64□□□□□ -0.23
LIN28A-202ENST00000326279 COQ4Q9Y3A0 265 aa13.64□□□□□ -0.23
LIN28A-202ENST00000326279 SLC4A7Q9Y6M7 1214 aa13.64□□□□□ -0.23
LIN28A-202ENST00000326279 MSI1O43347 362 aaKnown RBP13.64□□□□□ -0.23
LIN28A-202ENST00000326279 AMPD1P23109 780 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms