RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 SNRNP25Q9BV90 132 aaKnown RBP12.26□□□□□ -0.45
DDR1-223ENST00000324771 KCNH4Q9UQ05 1017 aa12.26□□□□□ -0.45
DDR1-223ENST00000324771 SIGLEC16A6NMB1 481 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 NT5C1B-RDH14C9J2C7 533 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 ERBB2P04626 1255 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 MX2P20592 715 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 RPL22P35268 128 aaKnown RBP12.25□□□□□ -0.45
DDR1-223ENST00000324771 TXNRD3NBQ6F5E7 133 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 PTPRN2Q92932 1015 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 PPWD1Q96BP3 646 aaKnown RBP12.25□□□□□ -0.45
DDR1-223ENST00000324771 SGSM3Q96HU1 749 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 STARD7Q9NQZ5 370 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 SMPD4Q9NXE4 827 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 ST3GAL5Q9UNP4 418 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 ANGPTL3Q9Y5C1 460 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 CCT8L1PA6NM43 557 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 HCRTO43612 131 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 GMNNO75496 209 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 TGM2P21980 687 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 AARSP49588 968 aaKnown RBP eCLIP12.25□□□□□ -0.45
DDR1-223ENST00000324771 ERMARDQ5T6L9 678 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 CD302Q8IX05 232 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 LGMNQ99538 433 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 C12orf65Q9H3J6 166 aaKnown RBP12.25□□□□□ -0.45
DDR1-223ENST00000324771 TASP1Q9H6P5 420 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 PTPRJQ12913 1337 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 LAMB4A4D0S4 1761 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 ODC1P11926 461 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 NOVP48745 357 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 ATXN1P54253 815 aaKnown RBP12.25□□□□□ -0.45
DDR1-223ENST00000324771 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 STX3Q13277 289 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 LRRC36Q1X8D7 754 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 SLC10A6Q3KNW5 377 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 DUSP28Q4G0W2 176 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 TAS2R42Q7RTR8 314 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 KATNAL2Q8IYT4 538 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 NTPCRQ9BSD7 190 aaKnown RBP12.25□□□□□ -0.45
DDR1-223ENST00000324771 PCDH9Q9HC56 1237 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 KLC4Q9NSK0 619 aa12.25□□□□□ -0.45
DDR1-223ENST00000324771 AFF4Q9UHB7 1163 aaKnown RBP12.25□□□□□ -0.45
DDR1-223ENST00000324771 SMG5Q9UPR3 1016 aaKnown RBP12.25□□□□□ -0.45
DDR1-223ENST00000324771 TMEM191CA6NGB0 347 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 PRRG1O14668 218 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 MT-CO1P00395 513 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 ATP4AP20648 1035 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 SREBF2Q12772 1141 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 POU6F1Q14863 301 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 MORF4L2Q15014 288 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 CTXN3Q4LDR2 81 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 BRI3BPQ8WY22 251 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
DDR1-223ENST00000324771 PHTF1Q9UMS5 762 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 NRCAMQ92823 1304 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 AGPSO00116 658 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 PAEPP09466 180 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 ART3Q13508 389 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 ZCCHC23Q6ZST2 131 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 NIFKQ9BYG3 293 aaKnown RBP12.24□□□□□ -0.45
DDR1-223ENST00000324771 R3HDMLQ9H3Y0 253 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 FSCN2O14926 492 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 CREB1P16220 341 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 PTPN1P18031 435 aaKnown RBP12.24□□□□□ -0.45
DDR1-223ENST00000324771 SLC8A1P32418 973 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 AUHQ13825 339 aaKnown RBP12.24□□□□□ -0.45
DDR1-223ENST00000324771 FASTKD3Q14CZ7 662 aaKnown RBP12.24□□□□□ -0.45
DDR1-223ENST00000324771 TAF11Q15544 211 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 NBPF20Q3BBV1 942 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 GBP7Q8N8V2 638 aaPredicted RBP12.24□□□□□ -0.45
DDR1-223ENST00000324771 TWNKQ96RR1 684 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 MTG1Q9BT17 334 aaPredicted RBP12.24□□□□□ -0.45
DDR1-223ENST00000324771 MANSC1Q9H8J5 431 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 SENP1Q9P0U3 644 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 PRKAG2Q9UGJ0 569 aa12.24□□□□□ -0.45
DDR1-223ENST00000324771 LIASO43766 372 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 MSCO60682 206 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 DGKIO75912 1065 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 UBOX5O94941 541 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 POLBP06746 335 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 BGNP21810 368 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 ADRA1DP25100 572 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 CSE1LP55060 971 aaKnown RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 SLC20A2Q08357 652 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 FAAP100Q0VG06 881 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 TWF1Q12792 350 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 KBTBD12Q3ZCT8 623 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 PMF1Q6P1K2 205 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 PHF13Q86YI8 300 aaPredicted RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 BLOC1S5Q8TDH9 187 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 TCP10LQ8TDR4 215 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 FBXO32Q969P5 355 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 C12orf42Q96LP6 360 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 DPEP3Q9H4B8 488 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 PDZD7Q9H5P4 517 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 HAO1Q9UJM8 370 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 AHDC1Q5TGY3 1603 aaPredicted RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 A0A0G2JLL6 359 aaPredicted RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 IGF2BP3O00425 579 aaKnown RBP eCLIP12.23□□□□□ -0.453e-6■□□□□ 10.4
DDR1-223ENST00000324771 PPEF2O14830 753 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms