RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 HS6ST3Q8IZP7 471 aa13.01□□□□□ -0.33
FN1-201ENST00000323926 C1orf54Q8WWF1 131 aa13.01□□□□□ -0.33
FN1-201ENST00000323926 USP18Q9UMW8 372 aa13.01□□□□□ -0.33
FN1-201ENST00000323926 FER1L6Q2WGJ9 1857 aa13□□□□□ -0.33
FN1-201ENST00000323926 CAND2O75155 1236 aa13□□□□□ -0.33
FN1-201ENST00000323926 CAPN15O75808 1086 aa13□□□□□ -0.33
FN1-201ENST00000323926 KRT6AP02538 564 aa13□□□□□ -0.33
FN1-201ENST00000323926 KRT6BP04259 564 aa13□□□□□ -0.33
FN1-201ENST00000323926 URODP06132 367 aa13□□□□□ -0.33
FN1-201ENST00000323926 FGFR4P22455 802 aa13□□□□□ -0.33
FN1-201ENST00000323926 KRT6CP48668 564 aa13□□□□□ -0.33
FN1-201ENST00000323926 FGD2Q7Z6J4 655 aa13□□□□□ -0.33
FN1-201ENST00000323926 METTL16Q86W50 562 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 BTBD7Q9P203 1132 aa13□□□□□ -0.33
FN1-201ENST00000323926 NAGPAQ9UK23 515 aa13□□□□□ -0.33
FN1-201ENST00000323926 TNPO3Q9Y5L0 923 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 TRDMT1O14717 391 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 SYNCRIPO60506 623 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 MED24O75448 989 aa13□□□□□ -0.33
FN1-201ENST00000323926 HLA-DRAP01903 254 aa13□□□□□ -0.33
FN1-201ENST00000323926 DARSP14868 501 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 CEP78Q5JTW2 689 aa13□□□□□ -0.33
FN1-201ENST00000323926 GPAT2Q6NUI2 795 aa13□□□□□ -0.33
FN1-201ENST00000323926 CHSY1Q86X52 802 aa13□□□□□ -0.33
FN1-201ENST00000323926 DLG3Q92796 817 aa13□□□□□ -0.33
FN1-201ENST00000323926 TRIM63Q969Q1 353 aa13□□□□□ -0.33
FN1-201ENST00000323926 OSBPL6Q9BZF3 934 aa13□□□□□ -0.33
FN1-201ENST00000323926 KCNA3P22001 575 aa13□□□□□ -0.33
FN1-201ENST00000323926 SNAP25P60880 206 aa13□□□□□ -0.33
FN1-201ENST00000323926 THTPAQ9BU02 230 aa13□□□□□ -0.33
FN1-201ENST00000323926 MIEF1Q9NQG6 463 aa13□□□□□ -0.33
FN1-201ENST00000323926 MYOM1P52179 1685 aa13□□□□□ -0.33
FN1-201ENST00000323926 TMEM120BA0PK00 339 aa13□□□□□ -0.33
FN1-201ENST00000323926 RNF103O00237 685 aa13□□□□□ -0.33
FN1-201ENST00000323926 CNOT3O75175 753 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 CSF1RP07333 972 aa13□□□□□ -0.33
FN1-201ENST00000323926 GOLGA7BQ2TAP0 167 aa13□□□□□ -0.33
FN1-201ENST00000323926 GPR141Q7Z602 305 aa13□□□□□ -0.33
FN1-201ENST00000323926 JAMLQ86YT9 394 aa13□□□□□ -0.33
FN1-201ENST00000323926 ASCC2Q9H1I8 757 aaPredicted RBP13□□□□□ -0.33
FN1-201ENST00000323926 RPS6KL1Q9Y6S9 549 aa13□□□□□ -0.33
FN1-201ENST00000323926 ENO3P13929 434 aaPredicted RBP13□□□□□ -0.33
FN1-201ENST00000323926 GRK4P32298 578 aa13□□□□□ -0.33
FN1-201ENST00000323926 PMF1Q6P1K2 205 aa13□□□□□ -0.33
FN1-201ENST00000323926 KYAT3Q6YP21 454 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 ADCK2Q7Z695 626 aa13□□□□□ -0.33
FN1-201ENST00000323926 CCT7Q99832 543 aa13□□□□□ -0.33
FN1-201ENST00000323926 DMAP1Q9NPF5 467 aaPredicted RBP13□□□□□ -0.33
FN1-201ENST00000323926 MBD2Q9UBB5 411 aa13□□□□□ -0.33
FN1-201ENST00000323926 PDZK1P1A8MUH7 402 aa13□□□□□ -0.33
FN1-201ENST00000323926 CYP11B2P19099 503 aa13□□□□□ -0.33
FN1-201ENST00000323926 SMARCB1Q12824 385 aa13□□□□□ -0.33
FN1-201ENST00000323926 USP39Q53GS9 565 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 CCNI2Q6ZMN8 369 aaPredicted RBP13□□□□□ -0.33
FN1-201ENST00000323926 LRRC49Q8IUZ0 686 aa13□□□□□ -0.33
FN1-201ENST00000323926 PGBD3Q8N328 593 aa13□□□□□ -0.33
FN1-201ENST00000323926 RPRD1AQ96P16 312 aaPredicted RBP13□□□□□ -0.33
FN1-201ENST00000323926 FAM192AQ9GZU8 254 aa13□□□□□ -0.33
FN1-201ENST00000323926 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
FN1-201ENST00000323926 FGF10O15520 208 aaPredicted RBP12.99□□□□□ -0.33
FN1-201ENST00000323926 IYDQ6PHW0 289 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 PSMD12O00232 456 aaPredicted RBP12.99□□□□□ -0.33
FN1-201ENST00000323926 TDP2O95551 362 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 GNASQ5JWF2 1037 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 CNTNAP5Q8WYK1 1306 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 PDE9AO76083 593 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 ASS1P00966 412 aaKnown RBP12.99□□□□□ -0.33
FN1-201ENST00000323926 CTCFP49711 727 aaPredicted RBP12.99□□□□□ -0.33
FN1-201ENST00000323926 ZRANB3Q5FWF4 1079 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 SPANXN3Q5MJ09 141 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 SPATA5L1Q9BVQ7 753 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 UGT2B28Q9BY64 529 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 VTA1Q9NP79 307 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 SH3BP4Q9P0V3 963 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 KRT34O76011 436 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 RHOBTB1O94844 696 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 TGFB2P61812 414 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 KDM7AQ6ZMT4 941 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 PCDH9Q9HC56 1237 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 KCNH7Q9NS40 1196 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 TRIM24O15164 1050 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 TRIM13O60858 407 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 DDR2Q16832 855 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 PABPC1LQ4VXU2 614 aaKnown RBP12.99□□□□□ -0.33
FN1-201ENST00000323926 ZNF280DQ6N043 979 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 FBXO33Q7Z6M2 555 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 EID3Q8N140 333 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 TMEM86AQ8N2M4 240 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 AGPAT3Q9NRZ7 376 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 FAM50BQ9Y247 325 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 MAGEA13PA6NCF6 341 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 WEE2P0C1S8 567 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 SERPINH1P50454 418 aaKnown RBP12.99□□□□□ -0.33
FN1-201ENST00000323926 MSLNQ13421 630 aaPredicted RBP12.99□□□□□ -0.33
FN1-201ENST00000323926 CRYMQ14894 314 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 ERBB2P04626 1255 aa12.99□□□□□ -0.33
FN1-201ENST00000323926 TRIM49P0CI25 452 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms