RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 PSTKQ8IV42 348 aaKnown RBP12.49□□□□□ -0.41
NCL-201ENST00000322723 C12orf29Q8N999 325 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 ANKRD52Q8NB46 1076 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 SMG8Q8ND04 991 aaKnown RBP12.49□□□□□ -0.41
NCL-201ENST00000322723 SAE1Q9UBE0 346 aaPredicted RBP12.49□□□□□ -0.41
NCL-201ENST00000322723 HESX1Q9UBX0 185 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 DHRS4L1P0CG22 281 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 RNF43Q68DV7 783 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 PCDH19Q8TAB3 1148 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 SETD4Q9NVD3 440 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 UBQLN1Q9UMX0 589 aaKnown RBP12.49□□□□□ -0.41
NCL-201ENST00000322723 SMG5Q9UPR3 1016 aaKnown RBP12.49□□□□□ -0.41
NCL-201ENST00000322723 CFAP69A5D8W1 941 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 FOXO6A8MYZ6 492 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 GABRDO14764 452 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 BRAFP15056 766 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 GJC1P36383 396 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 PSMC4P43686 418 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 SNX17Q15036 470 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 MTFR1Q15390 333 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 HIF1AQ16665 826 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 TSNAXIP1Q2TAA8 658 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 C4orf22Q6V702 233 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 PPP1R21Q6ZMI0 780 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 FAM47EQ6ZV65 393 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 ZNF534Q76KX8 674 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 GSTA5Q7RTV2 222 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 NME8Q8N427 588 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 MCUQ8NE86 351 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 GBP5Q96PP8 586 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 OSBPL1AQ9BXW6 950 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 L1CAMP32004 1257 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 SCTRP47872 440 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 MFSD10Q14728 455 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 KCTD13Q8WZ19 329 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 C18orf25Q96B23 403 aaPredicted RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 MRRFQ96E11 262 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 PPP1R10Q96QC0 940 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 DNAJC17Q9NVM6 304 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 MKS1Q9NXB0 559 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 RCOR3Q9P2K3 495 aaPredicted RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 DGKIO75912 1065 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 SNUPNO95149 360 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 VPS41P49754 854 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 EIF3EP60228 445 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 TFDP2Q14188 446 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 ACCSLQ4AC99 568 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 TOP6BLQ8N6T0 577 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 KCTD6Q8NC69 237 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 BEST2Q8NFU1 509 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 CCDC77Q9BR77 488 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 VCXQ9H320 206 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 PSMC3IPQ9P2W1 217 aaPredicted RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 FAM47DPA6NHR8 397 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 SGK1O00141 431 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 RNF8O76064 485 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 CD4P01730 458 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 PNPLA4P41247 253 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 ERFP50548 548 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 ARL4CP56559 192 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 GEMIN4P57678 1058 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 BST2Q10589 180 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 CYS1Q717R9 158 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 STRADAQ7RTN6 431 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 HSFY1Q96LI6 401 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 SNRNP25Q9BV90 132 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 NXF3Q9H4D5 531 aaKnown RBP12.48□□□□□ -0.41
NCL-201ENST00000322723 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
NCL-201ENST00000322723 SMIM28A0A1B0GU29 152 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 GCATO75600 419 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 RECQL4O94761 1208 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 GSTA2P09210 222 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 CRYBB1P53674 252 aaPredicted RBP12.47□□□□□ -0.41
NCL-201ENST00000322723 SLC18A2Q05940 514 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 SOX4Q06945 474 aaPredicted RBP12.47□□□□□ -0.41
NCL-201ENST00000322723 MGAT5Q09328 741 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 DBN1Q16643 649 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 KIZQ2M2Z5 673 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 ARHGEF18Q6ZSZ5 1173 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 IGDCC3Q8IVU1 814 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 FUKQ8N0W3 1084 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 ATP11CQ8NB49 1132 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 ABTB1Q969K4 478 aaPredicted RBP12.47□□□□□ -0.41
NCL-201ENST00000322723 GRAMD1AQ96CP6 724 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.47□□□□□ -0.41
NCL-201ENST00000322723 PDGFRAP16234 1089 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 PRKCHP24723 683 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 PSEN2P49810 448 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 PDK4Q16654 411 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 CA9Q16790 459 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 QKIQ96PU8 341 aaKnown RBP eCLIP12.47□□□□□ -0.41
NCL-201ENST00000322723 SLC2A13Q96QE2 648 aa12.47□□□□□ -0.41
NCL-201ENST00000322723 UPF3AQ9H1J1 476 aaKnown RBP12.47□□□□□ -0.41
NCL-201ENST00000322723 MCM8Q9UJA3 840 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms