RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ARFIP2P53365 341 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 ALKBH8Q96BT7 664 aaKnown RBP18.1■□□□□ 0.49
COL9A1-201ENST00000320755 GBA2Q9HCG7 927 aaPredicted RBP18.1■□□□□ 0.49
COL9A1-201ENST00000320755 CYLDQ9NQC7 956 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 SNTG2Q9NY99 539 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 PAK5Q9P286 719 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 C2CD2LO14523 706 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 ENTPD5O75356 428 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 LCP1P13796 627 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 GRIA1P42261 906 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 GBE1Q04446 702 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 SLC45A4Q5BKX6 768 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 SESTD1Q86VW0 696 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 C18orf25Q96B23 403 aaPredicted RBP18.09■□□□□ 0.49
COL9A1-201ENST00000320755 OPTNQ96CV9 577 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 ZNF395Q9H8N7 513 aaPredicted RBP18.09■□□□□ 0.49
COL9A1-201ENST00000320755 ENDOD1O94919 500 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 NPTXRO95502 500 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 GM2AP17900 193 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 BOLA3Q53S33 107 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 ZNF484Q5JVG2 852 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 TTC8Q8TAM2 541 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 APOPT1Q96IL0 206 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 SRPK1Q96SB4 655 aaKnown RBP18.09■□□□□ 0.49
COL9A1-201ENST00000320755 KLC2Q9H0B6 622 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 SSU72Q9NP77 194 aaKnown RBP18.09■□□□□ 0.49
COL9A1-201ENST00000320755 ETNK2Q9NVF9 386 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 HESX1Q9UBX0 185 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 FETUBQ9UGM5 382 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 SYNJ2BP-COX16A0A087WUM0 186 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 PAPSS1O43252 624 aaPredicted RBP18.09■□□□□ 0.49
COL9A1-201ENST00000320755 TSPAN1O60635 241 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 KITP10721 976 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 OSBPP22059 807 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 MROH9Q5TGP6 573 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 BSPRYQ5W0U4 402 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 TTC7BQ86TV6 843 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 CAND1Q86VP6 1230 aaKnown RBP18.09■□□□□ 0.49
COL9A1-201ENST00000320755 ARMC2Q8NEN0 867 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 NUDCD1Q96RS6 583 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 TMEM120AQ9BXJ8 343 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 DPEP3Q9H4B8 488 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 ARL8BQ9NVJ2 186 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 COX16Q9P0S2 106 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 MARCOQ9UEW3 520 aaPredicted RBP18.09■□□□□ 0.49
COL9A1-201ENST00000320755 ITGA11Q9UKX5 1188 aa18.09■□□□□ 0.49
COL9A1-201ENST00000320755 SCN1AP35498 2009 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 CYB561D2O14569 222 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 SERPINB4P48594 390 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 TLDC1Q6P9B6 456 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 TRMT10BQ6PF06 316 aaKnown RBP18.08■□□□□ 0.49
COL9A1-201ENST00000320755 OLFML1Q6UWY5 402 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 SLC26A11Q86WA9 606 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 ANKRD13AQ8IZ07 590 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 MPP5Q8N3R9 675 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 ZMAT2Q96NC0 199 aaKnown RBP18.08■□□□□ 0.49
COL9A1-201ENST00000320755 ARMCX1Q9P291 453 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 TUBGCP4Q9UGJ1 667 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 WDR90Q96KV7 1748 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 PTPRFP10586 1907 aa18.08■□□□□ 0.49
COL9A1-201ENST00000320755 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.08■□□□□ 0.48
COL9A1-201ENST00000320755 FAM237BA0A1B0GVD1 139 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.08■□□□□ 0.48
COL9A1-201ENST00000320755 H3BRB1 525 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 CHADO15335 359 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 GABBR2O75899 941 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 METTL18O95568 372 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 RASSF2P50749 326 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 SLC6A3Q01959 620 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 TUT1Q9H6E5 874 aaKnown RBP18.08■□□□□ 0.48
COL9A1-201ENST00000320755 SMYD2Q9NRG4 433 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 MFHAS1Q9Y4C4 1052 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 DNAH12Q6ZR08 3092 aa18.08■□□□□ 0.48
COL9A1-201ENST00000320755 HAUS5O94927 633 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 TOP3BO95985 862 aaKnown RBP18.07■□□□□ 0.48
COL9A1-201ENST00000320755 CYP2F1P24903 491 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 HDAC4P56524 1084 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 CRADDP78560 199 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 INCA1Q0VD86 236 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 ANKRD20A3Q5VUR7 823 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 CASC4Q6P4E1 433 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 KHSRPQ92945 711 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL9A1-201ENST00000320755 TTLL3Q9Y4R7 772 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 NME7Q9Y5B8 376 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 A8MXQ7 604 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 SMAPO00193 183 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 MYL2P10916 166 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 CCDC130P13994 396 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 LAMC2Q13753 1193 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 MTHFD1LQ6UB35 978 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 NDRG1Q92597 394 aaKnown RBP18.07■□□□□ 0.48
COL9A1-201ENST00000320755 ZNF570Q96NI8 536 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 CEP41Q9BYV8 373 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 VRTNQ9H8Y1 702 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 GEMIN8Q9NWZ8 242 aaKnown RBP18.07■□□□□ 0.48
COL9A1-201ENST00000320755 PAPPA2Q9BXP8 1791 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 CXCL11O14625 94 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 KRT37O76014 449 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 CPA2P48052 419 aa18.07■□□□□ 0.48
COL9A1-201ENST00000320755 NEK3P51956 506 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms