RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 TPBGLP0DKB5 382 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 RFC5P40937 340 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 COMMD2Q86X83 199 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 GANQ9H2C0 597 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 AHSPQ9NZD4 102 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 SLC24A2Q9UI40 661 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 BTN3A3O00478 584 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 TTC27Q6P3X3 843 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 DCP1BQ8IZD4 617 aaKnown RBP12.51□□□□□ -0.41
FARP1-201ENST00000319562 MARCH10Q8NA82 808 aaPredicted RBP12.51□□□□□ -0.41
FARP1-201ENST00000319562 BLOC1S5Q8TDH9 187 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 NSMCE2Q96MF7 247 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 NUAK2Q9H093 628 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 TMBIM4Q9HC24 238 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 TBX3O15119 743 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 TAF8Q7Z7C8 310 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 DEFB107AQ8IZN7 70 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 POLR1BQ9H9Y6 1135 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 DCP1AQ9NPI6 582 aaPredicted RBP12.51□□□□□ -0.41
FARP1-201ENST00000319562 MYCP01106 439 aaPredicted RBP12.51□□□□□ -0.41
FARP1-201ENST00000319562 TSPAN19P0C672 248 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 ETFBP38117 255 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 RFX3P48380 749 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 SLC20A1Q8WUM9 679 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 MPOP05164 745 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 PNPLA4P41247 253 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 FXR1P51114 621 aaKnown RBP eCLIP12.51□□□□□ -0.41
FARP1-201ENST00000319562 DDX39BQ13838 428 aaKnown RBP12.51□□□□□ -0.41
FARP1-201ENST00000319562 TTLL6Q8N841 843 aa12.51□□□□□ -0.41
FARP1-201ENST00000319562 POLR1AO95602 1720 aaPredicted RBP12.5□□□□□ -0.41
FARP1-201ENST00000319562 CCDC182A6NF36 153 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 CASP4P49662 377 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 B3GNT6Q6ZMB0 384 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 EMILIN2Q9BXX0 1053 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 FAM49BQ9NUQ9 324 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.5□□□□□ -0.41
FARP1-201ENST00000319562 KCNH4Q9UQ05 1017 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 BCLAF3A2AJT9 711 aaKnown RBP12.5□□□□□ -0.41
FARP1-201ENST00000319562 WWP2O00308 870 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 RAD51BO15315 384 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 CRTAMO95727 393 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 GRIK3Q13003 919 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 NEDD8Q15843 81 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 RGS21Q2M5E4 152 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 AGKQ53H12 422 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 EPS8L3Q8TE67 593 aaKnown RBP12.5□□□□□ -0.41
FARP1-201ENST00000319562 SEPT5Q99719 369 aaPredicted RBP12.5□□□□□ -0.41
FARP1-201ENST00000319562 CHST12Q9NRB3 414 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 DDX18Q9NVP1 670 aaKnown RBP12.5□□□□□ -0.41
FARP1-201ENST00000319562 CPSF4O95639 269 aaKnown RBP12.5□□□□□ -0.41
FARP1-201ENST00000319562 LDLRP01130 860 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 NT5DC4Q86YG4 428 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 GDPD5Q8WTR4 605 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 A0A1W2PRG6 482 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 GHRP10912 638 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 BCAP31P51572 246 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 ZNF284Q2VY69 593 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 FBXO42Q6P3S6 717 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 STRA8Q7Z7C7 330 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 AP3M1Q9Y2T2 418 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 AHCYL1O43865 530 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 EXOC3L1Q86VI1 746 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 NIF3L1Q9GZT8 377 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 MROH7Q68CQ1 1323 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 GYPCP04921 128 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 IRF1P10914 325 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 CDH18Q13634 790 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 TC2NQ8N9U0 490 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 CASKIN2Q8WXE0 1202 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 ZNF668Q96K58 619 aaPredicted RBP12.5□□□□□ -0.41
FARP1-201ENST00000319562 PNKPQ96T60 521 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 DNAJC16Q9Y2G8 782 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 VPS4BO75351 444 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 GPRASP2Q96D09 838 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 HPDLQ96IR7 371 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 TNFRSF21O75509 655 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 PCNAP12004 261 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 DSG3P32926 999 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 SGF29Q96ES7 293 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 ELOVL6Q9H5J4 265 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 NRDE2Q9H7Z3 1164 aa12.5□□□□□ -0.41
FARP1-201ENST00000319562 CDK12Q9NYV4 1490 aaPredicted RBP12.5□□□□□ -0.41
FARP1-201ENST00000319562 UBDO15205 165 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 CLOCKO15516 846 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 DDHD2O94830 711 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 SLC11A2P49281 568 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 TSHZ1Q6ZSZ6 1077 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 ZDHHC13Q8IUH4 622 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 CLVS1Q8IUQ0 354 aaPredicted RBP12.49□□□□□ -0.41
FARP1-201ENST00000319562 ARHGEF19Q8IW93 802 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 REREQ9P2R6 1566 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.49□□□□□ -0.41
FARP1-201ENST00000319562 PRLRP16471 622 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 ZNF177Q13360 481 aaPredicted RBP12.49□□□□□ -0.41
FARP1-201ENST00000319562 OR6Y1Q8NGX8 325 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 FNIP1Q8TF40 1166 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 BTBD10Q9BSF8 475 aa12.49□□□□□ -0.41
FARP1-201ENST00000319562 TCF7L2Q9NQB0 619 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms