RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 UGT2A3Q6UWM9 527 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 GALNT4Q8N4A0 578 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 RNF148Q8N7C7 305 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 KCTD6Q8NC69 237 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 OR5B17Q8NGF7 314 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 JOSD2Q8TAC2 188 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 PLEKHG4BQ96PX9 1271 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 MAN1C1Q9NR34 630 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 SMYD2Q9NRG4 433 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 UBAP1Q9NZ09 502 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 ZC3H7BQ9UGR2 993 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 CDH22Q9UJ99 828 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 POLIQ9UNA4 740 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 TBC1D30Q9Y2I9 924 aa10.02□□□□□ -0.81
PTPRA-202ENST00000318266 TDRKHQ9Y2W6 561 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 MRPL11Q9Y3B7 192 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 MYH9P35579 1960 aaKnown RBP10.02□□□□□ -0.81
PTPRA-202ENST00000318266 A0A0J9YVX5 310 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TESPA1A2RU30 521 aaPredicted RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 E7ESA3 106 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 H7C0C1 242 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 BBOX1O75936 387 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 APRTP07741 180 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 NELFEP18615 380 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 RGS2P41220 211 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 MAGEA10P43363 369 aaPredicted RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 ATP5OP48047 213 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 CNGA3Q16281 694 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TEX44Q53QW1 395 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 C1orf228Q6PIY5 440 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 B3GNT6Q6ZMB0 384 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 ANO5Q75V66 913 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TTLL6Q8N841 843 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 ZFP28Q8NHY6 868 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 LIN28AQ9H9Z2 209 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 APOBEC2Q9Y235 224 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 A0A1B0GTW7 788 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 SMIM31A0A1B0GVY4 71 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 PPEF1O14829 653 aaPredicted RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 MCF2LO15068 1137 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 STAM2O75886 525 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 CSH1P0DML2 217 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 CSH2P0DML3 217 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 CD1EP15812 388 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 FDFT1P37268 417 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TBL3Q12788 808 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TKFCQ3LXA3 575 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TATDN1Q6P1N9 297 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 KYAT3Q6YP21 454 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 WDR75Q8IWA0 830 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 MAP7D3Q8IWC1 876 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 KIAA0319LQ8IZA0 1049 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 CCDC28BQ9BUN5 200 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 MRPL1Q9BYD6 325 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 PNPOQ9NVS9 261 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 FETUBQ9UGM5 382 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 CCPG1Q9ULG6 757 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TELO2Q9Y4R8 837 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 NFASCO94856 1347 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 ZNF541Q9H0D2 1346 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 SDR42E2A6NKP2 422 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 PIK3R2O00459 728 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 DCXO43602 365 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 SIN3BO75182 1162 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 RFPL1O75677 317 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 IMPDH2P12268 514 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 ADARP55265 1226 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 MYLK3Q32MK0 819 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 HHIPL2Q6UWX4 724 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TRIM72Q6ZMU5 477 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 UNC5BQ8IZJ1 945 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 FBXL18Q96ME1 805 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 PRICKLE1Q96MT3 831 aaPredicted RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 ZNF778Q96MU6 729 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 AGO4Q9HCK5 861 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 PIH1D1Q9NWS0 290 aaKnown RBP10.01□□□□□ -0.81
PTPRA-202ENST00000318266 DNAJB4Q9UDY4 337 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 TEX264Q9Y6I9 313 aa10.01□□□□□ -0.81
PTPRA-202ENST00000318266 SCN4AP35499 1836 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 C3orf70A6NLC5 250 aaPredicted RBP10□□□□□ -0.81
PTPRA-202ENST00000318266 KLF11O14901 512 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 LRCH4O75427 683 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 CCNE2O96020 404 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 CD19P15391 556 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 ALDH1A3P47895 512 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 MRPS9P82933 396 aaKnown RBP10□□□□□ -0.81
PTPRA-202ENST00000318266 GRM2Q14416 872 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 PDK1Q15118 436 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 CYTH1Q15438 398 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 FASTKD1Q53R41 847 aaKnown RBP10□□□□□ -0.81
PTPRA-202ENST00000318266 SH2D4BQ5SQS7 431 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 FAM91A1Q658Y4 838 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 DUS1LQ6P1R4 473 aaKnown RBP10□□□□□ -0.81
PTPRA-202ENST00000318266 AAGABQ6PD74 315 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 FRMD7Q6ZUT3 714 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 DPH6Q7L8W6 267 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 ARFGAP1Q8N6T3 406 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 HSPBAP1Q96EW2 488 aa10□□□□□ -0.81
PTPRA-202ENST00000318266 DCUN1D1Q96GG9 259 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms