RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SLFN11Q7Z7L1 901 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 PARP8Q8N3A8 854 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 C10orf82Q8WW14 230 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 HSPBAP1Q96EW2 488 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 KREMEN1Q96MU8 473 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 RMDN3Q96TC7 470 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 SPATA16Q9BXB7 569 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 POLR3FQ9H1D9 316 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-201ENST00000317716 TMEM8AQ9HCN3 771 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 LY75O60449 1722 aa7.8□□□□□ -1.16
CDHR3-201ENST00000317716 ADAMTS7Q9UKP4 1686 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 MYH7BA7E2Y1 1941 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 BTNL10A8MVZ5 291 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 GNGT2O14610 69 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 EIF3DO15371 548 aaKnown RBP eCLIP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 FOXD2O60548 495 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 KLHL2O95198 593 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 CALB1P05937 261 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SPATA31C1P0DKV0 1188 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 PDGFRAP16234 1089 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SMARCA1P28370 1054 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 VCPP55072 806 aaKnown RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 NAA20P61599 178 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SUPT20HL1Q3ZLR7 823 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 COBLL1Q53SF7 1204 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 PERM1Q5SV97 790 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 ZBTB41Q5SVQ8 909 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 N4BP2L1Q5TBK1 243 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 NANOGNBQ7Z5D8 188 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SNX32Q86XE0 403 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 PCDH20Q8N6Y1 951 aaKnown RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 TTC13Q8NBP0 860 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 FAM156AQ8NDB6 213 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 GIPC3Q8TF64 312 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 NR1H4Q96RI1 486 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 PALMDQ9NP74 551 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 KLHL8Q9P2G9 620 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SLC24A2Q9UI40 661 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 COMMD3-BMI1R4GMX3 469 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 C4AP0C0L4 1744 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 COL1A1P02452 1464 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 MYO9BQ13459 2157 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 DYTNA2CJ06 578 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 RGL2O15211 777 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 ADCY6O43306 1168 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 FKBP6O75344 327 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 WFS1O76024 890 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 PARNO95453 639 aaKnown RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 TOP3BO95985 862 aaKnown RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 KRT7P08729 469 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 FAM58BPP0C7Q3 252 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 VCLP18206 1134 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 ALDH1A3P47895 512 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 STX1BP61266 288 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 ITKQ08881 620 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 DLG1Q12959 904 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 AGBL1Q96MI9 1066 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 MIPEPQ99797 713 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 EBF4Q9BQW3 602 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SNX25Q9H3E2 840 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 CCDC134Q9H6E4 229 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SLC38A10Q9HBR0 1119 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 DDX28Q9NUL7 540 aaKnown RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 HESX1Q9UBX0 185 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 FAM198AQ9UFP1 575 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 LRRC42Q9Y546 428 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 MYH3P11055 1940 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 LINC00854A0A1B0GVQ3 168 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 GTPBP10A4D1E9 387 aaKnown RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 FSCN2O14926 492 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 CDK7P50613 346 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 ZNF157P51786 506 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 TFDP2Q14188 446 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 TRIM16LQ309B1 348 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 TFDP3Q5H9I0 405 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 HEATR6Q6AI08 1181 aaKnown RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 HHIPL2Q6UWX4 724 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 TMEM179Q6ZVK1 233 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 LDHDQ86WU2 507 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 ZDHHC14Q8IZN3 488 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.79□□□□□ -1.16
CDHR3-201ENST00000317716 SEC14L1Q92503 715 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 PTPRN2Q92932 1015 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 FAM136AQ96C01 138 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 APOPT1Q96IL0 206 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 TASP1Q9H6P5 420 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 CYP4F12Q9HCS2 524 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 TUFT1Q9NNX1 390 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 NUB1Q9Y5A7 615 aa7.79□□□□□ -1.16
CDHR3-201ENST00000317716 A8MXQ7 604 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 TPD52L2O43399 206 aaKnown RBP7.78□□□□□ -1.16
CDHR3-201ENST00000317716 ITGA2BP08514 1039 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 TFPTP0C1Z6 253 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 NR4A1P22736 598 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 RGS2P41220 211 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 RAP1GAPP47736 663 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 RHBDL3P58872 404 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 DAB2P98082 770 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 CBX3Q13185 183 aa7.78□□□□□ -1.16
CDHR3-201ENST00000317716 SPDYCQ5MJ68 293 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms