RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SUGP1Q8IWZ8 645 aaKnown RBP14.79□□□□□ -0.04
VRK3-201ENST00000316763 PPIL6Q8IXY8 311 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 CYP4X1Q8N118 509 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 ACTL9Q8TC94 416 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 LPPQ93052 612 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 MCRS1Q96EZ8 462 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 SGSM3Q96HU1 749 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 HEXIM2Q96MH2 286 aaKnown RBP14.79□□□□□ -0.04
VRK3-201ENST00000316763 ELOVL4Q9GZR5 314 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 VPS37BQ9H9H4 285 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 SENP1Q9P0U3 644 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
VRK3-201ENST00000316763 USP15Q9Y4E8 981 aaPredicted RBP14.79□□□□□ -0.04
VRK3-201ENST00000316763 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.79□□□□□ -0.04
VRK3-201ENST00000316763 TRIP11Q15643 1979 aa14.79□□□□□ -0.04
VRK3-201ENST00000316763 ARL5CA6NH57 179 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 SNX3O60493 162 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 ERBB2P04626 1255 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 SYN1P17600 705 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 ARL4CP56559 192 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 DYNLT1P63172 113 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 IL9RQ01113 521 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 SMTNL2Q2TAL5 461 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 PLEKHG4Q58EX7 1191 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 DEFB128Q7Z7B8 93 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 ZNF598Q86UK7 904 aaKnown RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 RTN4RL1Q86UN2 441 aaPredicted RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 RFX6Q8HWS3 928 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 MAML1Q92585 1016 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 VWCEQ96DN2 955 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 MAGEB18Q96M61 343 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 GAD1Q99259 594 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 RGS18Q9NS28 235 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 SLC38A7Q9NVC3 462 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 EURLQ9NYK6 297 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 PDCD11Q14690 1871 aaKnown RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 FAM47DPA6NHR8 397 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 DNAJC8O75937 253 aaPredicted RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 CXCL10P02778 98 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 CSF2RAP15509 400 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 IL1R2P27930 398 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 PHBP35232 272 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 PNPLA4P41247 253 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 AFF1P51825 1210 aaKnown RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 PDE4CQ08493 712 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 PDIA2Q13087 525 aaKnown RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 HIF1AQ16665 826 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 CCDC142Q17RM4 750 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 NUGGCQ68CJ6 796 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 FAM43BQ6ZT52 329 aaPredicted RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 TRPM8Q7Z2W7 1104 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 ECHDC2Q86YB7 292 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 ZBED8Q8IZ13 594 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 ARFGAP1Q8N6T3 406 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 DBF4BQ8NFT6 615 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 GDAP1Q8TB36 358 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 PRCCQ92733 491 aaPredicted RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 GDAP2Q9NXN4 497 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 TJP2Q9UDY2 1190 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 SLC24A2Q9UI40 661 aa14.78□□□□□ -0.04
VRK3-201ENST00000316763 BARX2Q9UMQ3 279 aaPredicted RBP14.78□□□□□ -0.04
VRK3-201ENST00000316763 LTBP2Q14767 1821 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 C9IYK1 514 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 POC1B-GALNT4F8VUJ3 575 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 INPPL1O15357 1258 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 ATP2C2O75185 946 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 TRUB2O95900 331 aaKnown RBP14.77□□□□□ -0.04
VRK3-201ENST00000316763 THP07101 528 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 PCK1P35558 622 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 FAM189BP81408 668 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 ORC1Q13415 861 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 RASA2Q15283 850 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 STILQ15468 1287 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 KCNT1Q5JUK3 1230 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 FAM102AQ5T9C2 384 aaPredicted RBP14.77□□□□□ -0.04
VRK3-201ENST00000316763 LIMS2Q7Z4I7 341 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 TMEM199Q8N511 208 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 EMC1Q8N766 993 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 CMASQ8NFW8 434 aaPredicted RBP14.77□□□□□ -0.04
VRK3-201ENST00000316763 LINC01599Q8WXQ3 324 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 BADQ92934 168 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 GRAMD1AQ96CP6 724 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 PGBD4Q96DM1 585 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 ZNF560Q96MR9 790 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 TWNKQ96RR1 684 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 TGS1Q96RS0 853 aaKnown RBP14.77□□□□□ -0.04
VRK3-201ENST00000316763 FTHL17Q9BXU8 183 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 MAK16Q9BXY0 300 aaKnown RBP14.77□□□□□ -0.04
VRK3-201ENST00000316763 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.04
VRK3-201ENST00000316763 RSAD1Q9HA92 442 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 GOLGA2P5Q9HBQ8 144 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 SLC40A1Q9NP59 571 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 FGFR1OP2Q9NVK5 253 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 MIOSQ9NXC5 875 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 PCSK1NQ9UHG2 260 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 ZMYND8Q9ULU4 1186 aaPredicted RBP14.77□□□□□ -0.04
VRK3-201ENST00000316763 USP18Q9UMW8 372 aa14.77□□□□□ -0.04
VRK3-201ENST00000316763 APOC4-APOC2K7ER74 178 aa14.76□□□□□ -0.05
VRK3-201ENST00000316763 MCF2LO15068 1137 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms