RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 MANEALQ5VSG8 457 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 OR6B3Q8NGW1 331 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 CLEC4CQ8WTT0 213 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ZNF296Q8WUU4 475 aaPredicted RBP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 QKIQ96PU8 341 aaKnown RBP eCLIP7.49□□□□□ -1.215e-7■■■■□ 24
NPHP1-201ENST00000316534 SYT15Q9BQS2 421 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 PAAF1Q9BRP4 392 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 DDX43Q9NXZ2 648 aaKnown RBP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.49□□□□□ -1.21
NPHP1-201ENST00000316534 MYLKQ15746 1914 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 ANAPC1Q9H1A4 1944 aa7.49□□□□□ -1.21
NPHP1-201ENST00000316534 CFAP69A5D8W1 941 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 HACD1B0YJ81 288 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 SYN3O14994 580 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 DCLK1O15075 740 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CACNG3O60359 315 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 KRT14P02533 472 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 SELPP16109 830 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 PECAM1P16284 738 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 TFE3P19532 575 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 STIP1P31948 543 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ITGA8P53708 1063 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ARHGEF6Q15052 776 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 C15orf59Q2T9L4 293 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 UBAP2Q5T6F2 1119 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 AFMIDQ63HM1 303 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CCDC105Q8IYK2 499 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ZSCAN18Q8TBC5 510 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 FAM172AQ8WUF8 416 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 LPPQ93052 612 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 SMARCD1Q96GM5 515 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CFAP57Q96MR6 1250 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 KCTD15Q96SI1 283 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 KANSL3Q9P2N6 904 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ACTL7BQ9Y614 415 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ZNF106Q9H2Y7 1883 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ATP2C2O75185 946 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 TTC4O95801 387 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 FGFR3P22607 806 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 MMP13P45452 471 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 GLUD2P49448 558 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 OTUD4Q01804 1114 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 DHX9Q08211 1270 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 TFDP2Q14188 446 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 FRG1Q14331 258 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CA9Q16790 459 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 NCBP2-AS2Q69YL0 99 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 MSANTD2Q6P1R3 559 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CYS1Q717R9 158 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 SCUBE3Q8IX30 993 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 RNF169Q8NCN4 708 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 OR10T2Q8NGX3 314 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 RIN2Q8WYP3 895 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 FUBP3Q96I24 572 aaKnown RBP eCLIP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 SERPINB12Q96P63 405 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ADAM2Q99965 735 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 FRMD8Q9BZ67 464 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 KLC2Q9H0B6 622 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 HSFX1Q9UBD0 423 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 MTRF1LQ9UGC7 380 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 PTPN22Q9Y2R2 807 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ATG2AQ2TAZ0 1938 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 C5orf60A6NFR6 353 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 I6L893 689 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CHADO15335 359 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 RNF8O76064 485 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 DDHD2O94830 711 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ZFXP17010 805 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 PCSK1P29120 753 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 GRK4P32298 578 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CXCR3P49682 368 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 MAPRE1Q15691 268 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 ARMC3Q5W041 872 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 LRRC8DQ7L1W4 858 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 GPRIN1Q7Z2K8 1008 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 RIBC1Q8N443 379 aaPredicted RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 MCUQ8NE86 351 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CPT1BQ92523 772 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 C8orf48Q96LL4 319 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 DPH5Q9H2P9 285 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 CDC42EP4Q9H3Q1 356 aaKnown RBP7.48□□□□□ -1.21
NPHP1-201ENST00000316534 FAM204AQ9H8W3 233 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 POPDC2Q9HBU9 364 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 FAM49BQ9NUQ9 324 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 TMLHEQ9NVH6 421 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 NINJ2Q9NZG7 142 aa7.48□□□□□ -1.21
NPHP1-201ENST00000316534 MYBPHLA2RUH7 354 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 WASH4PA8MWX3 477 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 GOLGA8SH3BPF8 625 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 VNN2O95498 520 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 SHBGP04278 402 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 SDC4P31431 198 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 RDXP35241 583 aaKnown RBP7.47□□□□□ -1.21
NPHP1-201ENST00000316534 TNNT3P45378 269 aaPredicted RBP7.47□□□□□ -1.21
NPHP1-201ENST00000316534 GDF10P55107 478 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 OR6B2Q6IFH4 312 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 ZNF683Q8IZ20 524 aa7.47□□□□□ -1.21
NPHP1-201ENST00000316534 ACTL9Q8TC94 416 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms