RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 GOLGA8OA6NCC3 632 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 GOLGA8NF8WBI6 632 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 GOLGA8RI6L899 631 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 DENRO43583 198 aaKnown RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 NMT2O60551 498 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ALX3O95076 343 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 CYP2D6P10635 497 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 FGFR4P22455 802 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PRDX5P30044 214 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PSMC2P35998 433 aaKnown RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ARHGAP4P98171 946 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 TLR1Q15399 786 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 MAPK6Q16659 721 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 LONRF1Q17RB8 773 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 TRIM16LQ309B1 348 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 LLGL2Q6P1M3 1020 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 AAGABQ6PD74 315 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PAOXQ6QHF9 649 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ISLR2Q6UXK2 745 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 RNF19BQ6ZMZ0 732 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 CAND1Q86VP6 1230 aaKnown RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 RAB3IL1Q8TBN0 382 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 FBXO25Q8TCJ0 367 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 HSD17B14Q9BPX1 270 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 COA1Q9GZY4 146 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 Q9H521 79 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 NEK6Q9HC98 313 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 MOV10Q9HCE1 1003 aaKnown RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ABI2Q9NYB9 513 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PADI4Q9UM07 663 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 CNTN6Q9UQ52 1028 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ERGIC3Q9Y282 383 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ATP11BQ9Y2G3 1177 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 FNDC1Q4ZHG4 1894 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 CYP2D7A0A087X1C5 515 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PABPN1LA6NDY0 278 aaKnown RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 A8MX80 341 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ACSL4O60488 711 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 EDF1O60869 148 aaKnown RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PPP1R11O60927 126 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ARHGEF15O94989 841 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 USP17L8P0C7I0 530 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 XRCC5P13010 732 aaKnown RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 NR4A1P22736 598 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 TECP42680 631 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ERFP50548 548 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 GNG2P59768 71 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ATP6V0D1P61421 351 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PTK2BQ14289 1009 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 GNA13Q14344 377 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 NPTX1Q15818 432 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 KIAA1755Q5JYT7 1200 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 DCAF12L1Q5VU92 463 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 C1orf186Q6ZWK4 172 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 KCNK18Q7Z418 384 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 GPR141Q7Z602 305 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 NOP9Q86U38 636 aaKnown RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ELMOD2Q8IZ81 293 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PAF1Q8N7H5 531 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 LNX1Q8TBB1 728 aaPredicted RBP6.89□□□□□ -1.31
ZNF540-201ENST00000316433 GDPD5Q8WTR4 605 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 VCPIP1Q96JH7 1222 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 RANBP9Q96S59 729 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 FERMT1Q9BQL6 677 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 ZSWIM1Q9BR11 485 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 C17orf80Q9BSJ5 609 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 EHMT1Q9H9B1 1298 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 C17orf75Q9HAS0 396 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 CYLDQ9NQC7 956 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 C8orf4Q9NR00 106 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 LRRC4BQ9NT99 713 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 DCAF16Q9NXF7 216 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PI4KBQ9UBF8 816 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 PCDHA12Q9UN75 941 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 RWDD3Q9Y3V2 267 aa6.89□□□□□ -1.31
ZNF540-201ENST00000316433 IGLV3-22A0A075B6J6 115 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 GOLGA8JA6NMD2 632 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 KPNA4O00629 521 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 SCO2O43819 266 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 ONECUT3O60422 494 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 RARBP10826 455 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 ITIH2P19823 946 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 PEX2P28328 305 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 WEE1P30291 646 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 FDFT1P37268 417 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 BTDP43251 543 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 IREB2P48200 963 aaKnown RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 CLK1P49759 484 aaKnown RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 CASP5P51878 434 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 HIRAP54198 1017 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 MYBPC1Q00872 1141 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 IKQ13123 557 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 SELENBP1Q13228 472 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 FAM47AQ5JRC9 791 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 NEK5Q6P3R8 708 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 TAS2R42Q7RTR8 314 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 KIAA2013Q8IYS2 634 aa6.88□□□□□ -1.31
ZNF540-201ENST00000316433 Q8N9G6 341 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-201ENST00000316433 DTX3Q8N9I9 347 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms