RNA–Protein interactions for RNA: ENST00000316398.4

CCDC89-201, Transcript of coiled-coil domain containing 89, humanhuman

APPRIS P1 BASIC

Gene CCDC89, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89-201ENST00000316398 VPS37CA5D8V6 355 aaPredicted RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 CACNG3O60359 315 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 HOXB2P14652 356 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 AP3M2P53677 418 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 FAM193AP78312 1265 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 CEBPZQ03701 1054 aaKnown RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 KDSRQ06136 332 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 TRIP6Q15654 476 aaKnown RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 ANO4Q32M45 955 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 C10orf76Q5T2E6 689 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 SLC41A1Q8IVJ1 513 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 CHCHD4Q8N4Q1 142 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 MINDY1Q8N5J2 469 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 DEFB119Q8N690 84 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 PDILTQ8N807 584 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 IPO4Q8TEX9 1081 aaKnown RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 FOXJ1Q92949 421 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 WBP2Q969T9 261 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 XPO6Q96QU8 1125 aaKnown RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 GTPBP2Q9BX10 602 aaKnown RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 FBXO44Q9H4M3 255 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 ZSCAN16Q9H4T2 348 aaPredicted RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 CALCOCO1Q9P1Z2 691 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 NXF1Q9UBU9 619 aaKnown RBP12.13□□□□□ -0.47
CCDC89-201ENST00000316398 FREM2Q5SZK8 3169 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 CEP192Q8TEP8 1941 aa12.13□□□□□ -0.47
CCDC89-201ENST00000316398 TRIM24O15164 1050 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 C4BPAP04003 597 aaKnown RBP12.12□□□□□ -0.47
CCDC89-201ENST00000316398 ATP5C1P36542 298 aaKnown RBP12.12□□□□□ -0.47
CCDC89-201ENST00000316398 NASPP49321 788 aaPredicted RBP12.12□□□□□ -0.47
CCDC89-201ENST00000316398 ZNF132P52740 706 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 SLC5A3P53794 718 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 CDH8P55286 799 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 SYCP2LQ5T4T6 812 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 KIAA1211LQ6NV74 962 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 KLHDC10Q6PID8 442 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 CHPFQ8IZ52 775 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 FUKQ8N0W3 1084 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 TRIML1Q8N9V2 468 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 IQUBQ8NA54 791 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 LINC00301Q8NCQ3 95 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 ZMIZ2Q8NF64 920 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 PARD3BQ8TEW8 1205 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 SCFD1Q8WVM8 642 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 ADAMTS14Q8WXS8 1223 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 DNASE2BQ8WZ79 361 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 SMARCD1Q96GM5 515 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 MRGPRX1Q96LB2 322 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 USP28Q96RU2 1077 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 ACOX2Q99424 681 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 ZDHHC5Q9C0B5 715 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
CCDC89-201ENST00000316398 CYLDQ9NQC7 956 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 ITM2CQ9NQX7 267 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 TLR8Q9NR97 1041 aaKnown RBP12.12□□□□□ -0.47
CCDC89-201ENST00000316398 KIAA1522Q9P206 1035 aaPredicted RBP12.12□□□□□ -0.47
CCDC89-201ENST00000316398 SUSD2Q9UGT4 822 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 ATP8B3O60423 1300 aa12.12□□□□□ -0.47
CCDC89-201ENST00000316398 PRRT4C9JH25 899 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 CLIC2O15247 247 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 PPP6R2O75170 966 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 RPN1P04843 607 aaKnown RBP12.11□□□□□ -0.47
CCDC89-201ENST00000316398 TYRP14679 529 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 NDUFV2P19404 249 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 PLA2G4AP47712 749 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 PGFP49763 221 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 IFRD2Q12894 506 aaPredicted RBP12.11□□□□□ -0.47
CCDC89-201ENST00000316398 ACAP1Q15027 740 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 SGSM1Q2NKQ1 1148 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 FAM26FQ5R3K3 315 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 GRAMD4Q6IC98 578 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 DBX2Q6ZNG2 339 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 GLRX5Q86SX6 157 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 FAM35AQ86V20 835 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 PROSER1Q86XN7 944 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 CADM4Q8NFZ8 388 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 INTS4Q96HW7 963 aaKnown RBP12.11□□□□□ -0.47
CCDC89-201ENST00000316398 SMOQ99835 787 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 UPF2Q9HAU5 1272 aaKnown RBP12.11□□□□□ -0.47
CCDC89-201ENST00000316398 FSCN3Q9NQT6 498 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 GMIPQ9P107 970 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 LHX6Q9UPM6 363 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 NPC1O15118 1278 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 SH3BP5O60239 455 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 TLR5O60602 858 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 PHACTR2O75167 634 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 BEST1O76090 585 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 TBX18O95935 607 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 GNSP15586 552 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 ACO1P21399 889 aaKnown RBP12.11□□□□□ -0.47
CCDC89-201ENST00000316398 ENPP2Q13822 863 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
CCDC89-201ENST00000316398 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 WDR45BQ5MNZ6 344 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 EGFLAMQ63HQ2 1017 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 CCNI2Q6ZMN8 369 aaPredicted RBP12.11□□□□□ -0.47
CCDC89-201ENST00000316398 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
CCDC89-201ENST00000316398 UNC93AQ86WB7 457 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms