RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 TRIM16O95361 564 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 RBP1P09455 135 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 IRAK1P51617 712 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 ILF2Q12905 390 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 DNAJC3Q13217 504 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 CACHD1Q5VU97 1274 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 LZTR1Q8N653 840 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 FAM162AQ96A26 154 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 ABHD8Q96I13 439 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 CCDC134Q9H6E4 229 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 RBM22Q9NW64 420 aaKnown RBP eCLIP12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 SPACA6W5XKT8 324 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 PQBP1O60828 265 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 TMED1Q13445 227 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 NFIL3Q16649 462 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 ERMARDQ5T6L9 678 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 VSIG10LQ86VR7 867 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 VGLL2Q8N8G2 317 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 PCDH9Q9HC56 1237 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 ACOT9Q9Y305 439 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 PRR23AA6NEV1 266 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 CBX4O00257 560 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 CABYRO75952 493 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 CYP2F1P24903 491 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 RENBPP51606 427 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 PLD1Q13393 1074 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 SUGP1Q8IWZ8 645 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 DTX3LQ8TDB6 740 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 TUBGCP3Q96CW5 907 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 NSL1Q96IY1 281 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 SERPINB11Q96P15 392 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 TMEM121Q9BTD3 319 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 NT5MQ9NPB1 228 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 TIMM13Q9Y5L4 95 aaPredicted RBP12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 MAGEB16A2A368 324 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 RAMP2O60895 175 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 TOMM70O94826 608 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 EPB42P16452 691 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 AKAP5P24588 427 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 ANXA11P50995 505 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 TBX4P57082 545 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 MPP3Q13368 585 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 ICE2Q659A1 982 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 PRPF39Q86UA1 669 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 BBS7Q8IWZ6 715 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 DPF3Q92784 378 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 SLC24A2Q9UI40 661 aa12.34□□□□□ -0.43
AMBRA1-201ENST00000314845 MYL4P12829 197 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 DNAJB2P25686 324 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 SOAT1P35610 550 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 TUFMP49411 452 aaKnown RBP12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 DDX39BQ13838 428 aaKnown RBP12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 VGLL4Q14135 290 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 FAM171A1Q5VUB5 890 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 TRAPPC12Q8WVT3 735 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 ECSITQ9BQ95 431 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 C17orf80Q9BSJ5 609 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 ADNPQ9H2P0 1102 aa12.33□□□□□ -0.43
AMBRA1-201ENST00000314845 IQGAP1P46940 1657 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 CCT8L1PA6NM43 557 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 MYO1GB0I1T2 1018 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 PJA2O43164 708 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 SYNCRIPO60506 623 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 MSCO60682 206 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 TAL1P17542 331 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 NCKAP1LP55160 1127 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 CAMK2GQ13555 558 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 EARS2Q5JPH6 523 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 TMEM39AQ9NV64 488 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 LNPEPQ9UIQ6 1025 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 SHOC2Q9UQ13 582 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 DTNAQ9Y4J8 743 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 CYTH3O43739 400 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 TBC1D4O60343 1298 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 RTN3O95197 1032 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 GLP2RO95838 553 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 LGALS2P05162 132 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 MAPK1P28482 360 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 ZNF135P52742 658 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 DAB2P98082 770 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 PRKCQQ04759 706 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 MGAT5Q09328 741 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 ADIGQ0VDE8 80 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 CYTH1Q15438 398 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 C16orf87Q6PH81 154 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 APBB2Q92870 758 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 ZNF333Q96JL9 665 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 APOL2Q9BQE5 337 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 WDR41Q9HAD4 459 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 IARS2Q9NSE4 1012 aaKnown RBP12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 EML1O00423 815 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 ENDOD1O94919 500 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 KCNA4P22459 653 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 YWHAQP27348 245 aa12.33□□□□□ -0.44
AMBRA1-201ENST00000314845 SARSP49591 514 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms