RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 LRRC38Q5VT99 294 aa14.17□□□□□ -0.14
DDX54-202ENST00000314045 OLFML2BQ68BL8 750 aa14.17□□□□□ -0.14
DDX54-202ENST00000314045 TRIM67Q6ZTA4 783 aa14.17□□□□□ -0.14
DDX54-202ENST00000314045 RASAL3Q86YV0 1011 aa14.17□□□□□ -0.14
DDX54-202ENST00000314045 C20orf96Q9NUD7 363 aaPredicted RBP14.17□□□□□ -0.14
DDX54-202ENST00000314045 RAB21Q9UL25 225 aa14.17□□□□□ -0.14
DDX54-202ENST00000314045 CLGNO14967 610 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 INHAP05111 366 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 KDELR1P24390 212 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 MDH1P40925 334 aaKnown RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 PTK7Q13308 1070 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 SKIV2LQ15477 1246 aaKnown RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 TBC1D1Q86TI0 1168 aaPredicted RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 CRYGNQ8WXF5 182 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 CELF6Q96J87 481 aaKnown RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 MINDY3Q9H8M7 445 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 DCTN4Q9UJW0 460 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 SMG5Q9UPR3 1016 aaKnown RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 NCF2P19878 526 aaPredicted RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 SERPINB9P50453 376 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 JAM2P57087 298 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 ARHGAP15Q53QZ3 475 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 DAB2IPQ5VWQ8 1189 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 SLC24A5Q71RS6 500 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 LRRC6Q86X45 466 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 TOP6BLQ8N6T0 577 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 CDC42EP4Q9H3Q1 356 aaKnown RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 HIPK3Q9H422 1215 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 RPS6KL1Q9Y6S9 549 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 CCDC195A0A1B0GUA6 201 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 CLDN5O00501 218 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 PIGRP01833 764 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 SNRPAP09012 282 aaKnown RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 HOXD13P35453 343 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 PTPN20Q4JDL3 420 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 FASTKD1Q53R41 847 aaKnown RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 RABGAP1LQ5R372 815 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 CFAP61Q8NHU2 1237 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 GIPC2Q8TF65 315 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 APOBEC3GQ9HC16 384 aaKnown RBP14.16□□□□□ -0.14
DDX54-202ENST00000314045 ANKRD36CQ5JPF3 1778 aa14.16□□□□□ -0.14
DDX54-202ENST00000314045 SF3B1O75533 1304 aaKnown RBP eCLIP14.16□□□□□ -0.143e-6■■■■■ 139.6
DDX54-202ENST00000314045 CILPO75339 1184 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 ATG7O95352 703 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 TGM2P21980 687 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 ST8SIA6P61647 398 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 NLRP14Q86W24 1093 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 ALG3Q92685 438 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 ALKBH8Q96BT7 664 aaKnown RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 HES6Q96HZ4 224 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 SERPINB11Q96P15 392 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 APOL2Q9BQE5 337 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 SEMA4AQ9H3S1 761 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 SIX2Q9NPC8 291 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 SMPD4Q9NXE4 827 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 PPARGC1AQ9UBK2 798 aaKnown RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 SRRDQ9UH36 339 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 AKAP11Q9UKA4 1901 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 TRUB2O95900 331 aaKnown RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 PAX3P23760 479 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 NSUN2Q08J23 767 aaKnown RBP eCLIP14.15□□□□□ -0.14
DDX54-202ENST00000314045 LINC00523Q86TU6 105 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 FBXO36Q8NEA4 188 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 ABCF3Q9NUQ8 709 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 ADAMTS5Q9UNA0 930 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 KCNK1O00180 336 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 O00370 1275 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 NCAM2O15394 837 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 CHN1P15882 459 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 SPRP35270 261 aaPredicted RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 RPL21P46778 160 aaKnown RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 LHX5Q9H2C1 402 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 BCAP29Q9UHQ4 241 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 MYH7P12883 1935 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 SLX4Q8IY92 1834 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 GOLGA8QA0A0J9YX86 632 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 GOLGA8OA6NCC3 632 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 GOLGA8NF8WBI6 632 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 APOC4-APOC2K7ER74 178 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 RTN3O95197 1032 aaPredicted RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 APOC2P02655 101 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 SELPP16109 830 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 KPNA1P52294 538 aaPredicted RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 USP10Q14694 798 aaKnown RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 KCNT2Q6UVM3 1135 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 LCLAT1Q6UWP7 414 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 NUDT18Q6ZVK8 323 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 MYLPFQ96A32 169 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 FBXL18Q96ME1 805 aa14.15□□□□□ -0.14
DDX54-202ENST00000314045 SAE1Q9UBE0 346 aaPredicted RBP14.15□□□□□ -0.14
DDX54-202ENST00000314045 FAM47DPA6NHR8 397 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 NT5C1B-RDH14C9J2C7 533 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 TUBP50607 506 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 GEMP55040 296 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 TFAP2DQ7Z6R9 452 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 ZNF558Q96NG5 402 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 CEP41Q9BYV8 373 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 TKTL2Q9H0I9 626 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 PTCH2Q9Y6C5 1203 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 SLC30A1Q9Y6M5 507 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms