RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TJP2Q9UDY2 1190 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 FAM153AQ9UHL3 310 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 EIF3LQ9Y262 564 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 C2orf81A6NN90 581 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 GH2P01242 217 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 PSEN1P49768 467 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 EPHB1P54762 984 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 ELAVL2Q12926 359 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 TRIP13Q15645 432 aaPredicted RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CATSPER4Q7RTX7 472 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 HDDC2Q7Z4H3 204 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 SPATA16Q9BXB7 569 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 PALMDQ9NP74 551 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 AKAP7Q9P0M2 348 aaPredicted RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CNOT3O75175 753 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 VEPH1Q14D04 833 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CHSY1Q86X52 802 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF670Q9BS34 389 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 FER1L6Q2WGJ9 1857 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 HIST1H2AGP0C0S8 130 aaPredicted RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 HIST1H2ADP20671 130 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 GP5P40197 560 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 PTGER2P43116 358 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 HIRAP54198 1017 aaPredicted RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 MRPS15P82914 257 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 HIST1H2AHQ96KK5 128 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 PURBQ96QR8 312 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 HIST1H2AJQ99878 128 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 H2AFJQ9BTM1 129 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 TMEM134Q9H6X4 195 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 PNPLA3Q9NST1 481 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 SELENONQ9NZV5 590 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 NXF1Q9UBU9 619 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 ICE1Q9Y2F5 2266 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 ZNF12P17014 697 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CA8P35219 290 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 SMIM11AP58511 58 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 SLC12A1Q13621 1099 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 TCEAL1Q15170 157 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 NFE2Q16621 373 aaPredicted RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 TTC23Q5W5X9 447 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 FAM71AQ8IYT1 594 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 IQCKQ8N0W5 287 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 ADGRE3Q9BY15 652 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CYTH3O43739 400 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 C7P10643 843 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 NFKB1P19838 968 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 MROH9Q5TGP6 573 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 ADHFE1Q8IWW8 467 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 DACH2Q96NX9 599 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 FAM213AQ9BRX8 229 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 COG4Q9H9E3 785 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 PKD2L1Q9P0L9 805 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 RP1L1Q8IWN7 2480 aaPredicted RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 EGFRP00533 1210 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CCDC159P0C7I6 412 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CLK1P49759 484 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CCT8P50990 548 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 DYNLL1P63167 89 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 FAM98BQ52LJ0 330 aaKnown RBP9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CCDC80Q76M96 950 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 UBE2E3Q969T4 207 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 CNDP1Q96KN2 507 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 AIFM3Q96NN9 605 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 RNF146Q9NTX7 359 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 MKS1Q9NXB0 559 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 DLGAP2Q9P1A6 1054 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 DERAQ9Y315 318 aa9.09□□□□□ -0.95
COL6A5-202ENST00000312481 DNALI1O14645 258 aaPredicted RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ST13P50502 369 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 RNF219Q5W0B1 726 aaPredicted RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CYP4Z1Q86W10 505 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 ABRAQ8N0Z2 381 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 OXER1Q8TDS5 423 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 SMYD3Q9H7B4 428 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 STOML2Q9UJZ1 356 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 HEY1Q9Y5J3 304 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 AKT1P31749 480 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 STAT5BP51692 787 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 AMPD2Q01433 879 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 MAEAQ7L5Y9 396 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 NFASCO94856 1347 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 HNRNPCL2B2RXH8 293 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CYP1A2P05177 515 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CCDC166P0CW27 439 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 SP4Q02446 784 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 EMC2Q15006 297 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 UNC93AQ86WB7 457 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CATSPER3Q86XQ3 398 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 SHCBP1Q8NEM2 672 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 PIWIL2Q8TC59 973 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 SLC5A5Q92911 643 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 CLMNQ96JQ2 1002 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 TMEM245Q9H330 911 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 FBXO44Q9H4M3 255 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 USP18Q9UMW8 372 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 PDGFRAP16234 1089 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 TGFBR2P37173 567 aa9.08□□□□□ -0.96
COL6A5-202ENST00000312481 DALRD3Q5D0E6 543 aaKnown RBP9.08□□□□□ -0.96
COL6A5-202ENST00000312481 SPANXN2Q5MJ10 180 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms