RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 RNF112Q9ULX5 631 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 ZC3H4Q9UPT8 1303 aaKnown RBP13.56□□□□□ -0.24
SNED1-201ENST00000310397 ABLIM1O14639 778 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 ROR2Q01974 943 aaKnown RBP13.56□□□□□ -0.24
SNED1-201ENST00000310397 ACSF2Q96CM8 615 aaPredicted RBP13.56□□□□□ -0.24
SNED1-201ENST00000310397 LRRC39Q96DD0 335 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 ETAA1Q9NY74 926 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 VANGL2Q9ULK5 521 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 V9GYQ6 96 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 BCAT1P54687 386 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 HMGCS2P54868 508 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 NAB1Q13506 487 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 GSTA3Q16772 222 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 ACCSLQ4AC99 568 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 TMEM119Q4V9L6 283 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 GRTP1Q5TC63 336 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 FAXCQ5TGI0 409 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 EFCAB12Q6NXP0 572 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 SLC5A5Q92911 643 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 A0A087WXM4 84 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 MAP3K13O43283 966 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 NUDT17P0C025 328 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 RARAP10276 462 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 CNGA2Q16280 664 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 SELENONQ9NZV5 590 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 RHOBTB1O94844 696 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 ME2P23368 584 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 CCDC142Q17RM4 750 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 FAM151AQ8WW52 585 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 KATNAL1Q9BW62 490 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 TMEM131LA2VDJ0 1609 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 FAM205AQ6ZU69 1335 aa13.56□□□□□ -0.24
SNED1-201ENST00000310397 TCRBV5S4A2TA0A5A2 114 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 C2orf81A6NN90 581 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 GYS1P13807 737 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 DCTN2Q13561 401 aaKnown RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 KCNT1Q5JUK3 1230 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 NET1Q7Z628 596 aaPredicted RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 USP33Q8TEY7 942 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 CGRRF1Q99675 332 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 SIK3Q9Y2K2 1263 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 MYO9BQ13459 2157 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 LIN7AO14910 233 aaPredicted RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 TWF1Q12792 350 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 SV2AQ7L0J3 742 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 ZNF483Q8TF39 744 aaPredicted RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 CISHQ9NSE2 258 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 COMMD8Q9NX08 183 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 PNMA8CA0A1B0GUJ8 204 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 DDHD2O94830 711 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 TKTP29401 623 aaKnown RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 CEP78Q5JTW2 689 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 C9orf16Q9BUW7 83 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 RMND5AQ9H871 391 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 CFAP99D6REC4 459 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 VWA5AO00534 786 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 AHCYL1O43865 530 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 PMPCBO75439 489 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 CPB1P15086 417 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 WDR49Q8IV35 697 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 TAS1R2Q8TE23 839 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 DDX3XO00571 662 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNED1-201ENST00000310397 AGKQ53H12 422 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 AGAP11Q8TF27 550 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 CHST12Q9NRB3 414 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 ANKRD6Q9Y2G4 727 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 CYTH3O43739 400 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 NCF4Q15080 339 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 SAMD4BQ5PRF9 694 aaKnown RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 TCHHL1Q5QJ38 904 aaPredicted RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 CENPLQ8N0S6 344 aaPredicted RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 SRPK1Q96SB4 655 aaKnown RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 DPP3Q9NY33 737 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 ZMYND8Q9ULU4 1186 aaPredicted RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 OCM2P0CE71 109 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 OCMP0CE72 109 aaPredicted RBP13.55□□□□□ -0.24
SNED1-201ENST00000310397 IL31Q6EBC2 164 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 NINJ2Q9NZG7 142 aa13.55□□□□□ -0.24
SNED1-201ENST00000310397 TRIM24O15164 1050 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 ELK3P41970 407 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 TTC27Q6P3X3 843 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 FOXR2Q6PJQ5 311 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 CHST13Q8NET6 341 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 UBDO15205 165 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 PSMG1O95456 288 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 ABHD2P08910 425 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 GP5P40197 560 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 ADARP55265 1226 aaKnown RBP13.54□□□□□ -0.24
SNED1-201ENST00000310397 SNX17Q15036 470 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 KATNAL2Q8IYT4 538 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 OR6J1Q8NGC5 347 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 VPS33AQ96AX1 596 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 GPR63Q9BZJ6 419 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 M0QYT0 321 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 PDE2AO00408 941 aaPredicted RBP13.54□□□□□ -0.24
SNED1-201ENST00000310397 TPBGLP0DKB5 382 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 PTDSS1P48651 473 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms