RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 YWHAHQ04917 246 aaPredicted RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PTPN21Q16825 1174 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 OVOS1Q6IE37 1185 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 LRRC8DQ7L1W4 858 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 STRADAQ7RTN6 431 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 DCLK2Q8N568 766 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 LNX1Q8TBB1 728 aaPredicted RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 LRRC15Q8TF66 581 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 DACT3Q96B18 629 aaPredicted RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 FUBP3Q96I24 572 aaKnown RBP eCLIP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PSMB7Q99436 277 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 POP1Q99575 1024 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 COQ7Q99807 217 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SELENOSQ9BQE4 189 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 LACRTQ9GZZ8 138 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 NRDE2Q9H7Z3 1164 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 NOP53Q9NZM5 478 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 FNIP2Q9P278 1114 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SCOCQ9UIL1 159 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 LSM7Q9UK45 103 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 TSPAN16Q9UKR8 245 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SLC8A2Q9UPR5 921 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SMIM28A0A1B0GU29 152 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 NDUFB5O43674 189 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 AHCYL1O43865 530 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CSPG5O95196 566 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 TBC1D8O95759 1140 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 INHAP05111 366 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CPB1P15086 417 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 NOS2P35228 1153 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 COILP38432 576 aaPredicted RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CDH6P55285 790 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 RNASE9P60153 205 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CASP8Q14790 479 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 HEATR6Q6AI08 1181 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PPP4R4Q6NUP7 873 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 NEK10Q6ZWH5 1172 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CPLX4Q7Z7G2 160 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 NPAS4Q8IUM7 802 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 VPS52Q8N1B4 723 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CRYBG2Q8N1P7 616 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CD99L2Q8TCZ2 262 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 COG1Q8WTW3 980 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 USP13Q92995 863 aaPredicted RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 TMEM169Q96HH4 297 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 KREMEN1Q96MU8 473 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SLC9A7Q96T83 725 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 ADAM2Q99965 735 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 ACBD6Q9BR61 282 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SIKE1Q9BRV8 207 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 ADAMTS10Q9H324 1103 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PCDHB12Q9Y5F1 795 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PTPRJQ12913 1337 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 DPYSL4O14531 572 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 B3GAT3O94766 335 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 ZNF24P17028 368 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 NPR3P17342 541 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PTPN1P18031 435 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 LAG3P18627 525 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 STX2P32856 288 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 GRIK1P39086 918 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PTPN9P43378 593 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 TMEM62Q0P6H9 643 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PDCLQ13371 301 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 BYSLQ13895 437 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 FXNQ16595 210 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 KRT71Q3SY84 523 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 INTS6LQ5JSJ4 861 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 FAM26DQ5JW98 314 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PPP1R15BQ5SWA1 713 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 AGBL2Q5U5Z8 902 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CCDC25Q86WR0 208 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 ZNF354CQ86Y25 554 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 UNC45BQ8IWX7 931 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 MYO1HQ8N1T3 1032 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SPPL2BQ8TCT7 592 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SLC20A1Q8WUM9 679 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SENP8Q96LD8 212 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 DHRS1Q96LJ7 313 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SERPINB11Q96P15 392 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 HNRNPABQ99729 332 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 LBHD1Q9BQE6 289 aaPredicted RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 ZBED2Q9BTP6 218 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 TLR10Q9BXR5 811 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 XAB2Q9HCS7 855 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 DDX43Q9NXZ2 648 aaKnown RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SUN2Q9UH99 717 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PCYOX1Q9UHG3 505 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 TMCC3Q9ULS5 477 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CHMP2BQ9UQN3 213 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 WDR37Q9Y2I8 494 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 CAPN6Q9Y6Q1 641 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 IQANK1A0A1B0GTG1 560 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 PITPNM1O00562 1244 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 FGF10O15520 208 aaPredicted RBP6.23□□□□□ -1.41
SEC22A-201ENST00000309934 RRM1P23921 792 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 XRCC4Q13426 336 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 TOMM20Q15388 145 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 C11orf91Q3C1V1 193 aa6.23□□□□□ -1.41
SEC22A-201ENST00000309934 SLC39A4Q6P5W5 647 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms