RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 MTUS1Q9ULD2 1270 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CDY1Q9Y6F8 540 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CHD7Q9P2D1 2997 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 C3orf70A6NLC5 250 aaPredicted RBP13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 C2CD2LO14523 706 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TRIM66O15016 1216 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 GRM6O15303 877 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RPL17P18621 184 aaKnown RBP13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 MCM3P25205 808 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CDR1P51861 262 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ERVFC1P60507 584 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ROR1Q01973 937 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 KLF1Q13351 362 aaPredicted RBP13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 C15orf59Q2T9L4 293 aaPredicted RBP13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TXNRD3NBQ6F5E7 133 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CYP4V2Q6ZWL3 525 aaPredicted RBP13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 GPRIN1Q7Z2K8 1008 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ZDHHC14Q8IZN3 488 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 DEFB106AQ8N104 65 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PRELID2Q8N945 189 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 FAM172AQ8WUF8 416 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 CFAP57Q96MR6 1250 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RUNDC3BQ96NL0 473 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 NPY6RQ99463 290 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 LRRC1Q9BTT6 524 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 AP1M1Q9BXS5 423 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 RHOBTB2Q9BYZ6 727 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 OSBPL8Q9BZF1 889 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 MRPL17Q9NRX2 175 aaKnown RBP13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 HOMER3Q9NSC5 361 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TMEM51Q9NW97 253 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 COMMD8Q9NX08 183 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 FNIP2Q9P278 1114 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 MSRAQ9UJ68 235 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 NR2E1Q9Y466 385 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 IRAK3Q9Y616 596 aa13.4□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 COL4A4P53420 1690 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 WDR27A2RRH5 827 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 MTMR11A4FU01 709 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 ZNF487B1APH4 448 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 H3BNC9 293 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 MDM4O15151 490 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 PRPSAP2O60256 369 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 LTFP02788 710 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 FYNP06241 537 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 RARAP10276 462 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 H2AFXP16104 143 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 OR1D2P34982 312 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 GRIK1P39086 918 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 ARSEP51690 589 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 HDAC4P56524 1084 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 SMAD3P84022 425 aaKnown RBP13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 RAB33AQ14088 237 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 SH3PXD2AQ5TCZ1 1133 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 MFSD7Q6UXD7 560 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 SPOCD1Q6ZMY3 1216 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 RNF19BQ6ZMZ0 732 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 MAATS1Q7Z4T9 603 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 PSTKQ8IV42 348 aaKnown RBP13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 CCDC26Q8TAB7 109 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 FAM71BQ8TC56 605 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 POF1BQ8WVV4 589 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 RAPGEF5Q92565 580 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 PGAP3Q96FM1 320 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 SPATA17Q96L03 361 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 CRISPLD1Q9H336 500 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 LRRC19Q9H756 370 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 HSFX1Q9UBD0 423 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 STAP1Q9ULZ2 295 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 YJEFN3A6XGL0 299 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 BHMG1C9JSJ3 638 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 E7ENQ6 273 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 SOX1O00570 391 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 ABLIM3O94929 683 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 KRT1P04264 644 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 USP17L7P0C7H9 530 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 CPB1P15086 417 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 KDELR1P24390 212 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 DNAJB2P25686 324 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 CHRNA3P32297 505 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 CDKN2BP42772 138 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 ATP11AP98196 1134 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 BRD3Q15059 726 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 PDK2Q15119 407 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 TFDP3Q5H9I0 405 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 HABP4Q5JVS0 413 aaKnown RBP13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 C8orf74Q6P047 294 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 NDRG1Q92597 394 aaKnown RBP13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 FAM149B1Q96BN6 582 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 PEBP4Q96S96 227 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 KRT12Q99456 494 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 ABI2Q9NYB9 513 aaPredicted RBP13.38□□□□□ -0.27
SHANK2-AS3-201ENST00000307548 PCSK1NQ9UHG2 260 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms