RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TRMT5Q32P41 509 aaKnown RBP16.84■□□□□ 0.29
CCDC8-201ENST00000307522 NET1Q7Z628 596 aaPredicted RBP16.84■□□□□ 0.29
CCDC8-201ENST00000307522 SEMA4DQ92854 862 aa16.84■□□□□ 0.29
CCDC8-201ENST00000307522 TBC1D22BQ9NU19 505 aa16.84■□□□□ 0.29
CCDC8-201ENST00000307522 VAMP7P51809 220 aa16.84■□□□□ 0.29
CCDC8-201ENST00000307522 DMP1Q13316 513 aaPredicted RBP16.84■□□□□ 0.29
CCDC8-201ENST00000307522 ZCCHC9Q8N567 271 aaKnown RBP16.84■□□□□ 0.29
CCDC8-201ENST00000307522 ICA1LQ8NDH6 482 aa16.84■□□□□ 0.29
CCDC8-201ENST00000307522 PPP4R1Q8TF05 950 aa16.84■□□□□ 0.29
CCDC8-201ENST00000307522 ABHD8Q96I13 439 aa16.84■□□□□ 0.29
CCDC8-201ENST00000307522 IQCGQ9H095 443 aaKnown RBP16.84■□□□□ 0.29
CCDC8-201ENST00000307522 PLA2G4CQ9UP65 541 aa16.84■□□□□ 0.29
CCDC8-201ENST00000307522 MTO1Q9Y2Z2 717 aaKnown RBP16.84■□□□□ 0.29
CCDC8-201ENST00000307522 APOL6Q9BWW8 343 aa16.83■□□□□ 0.29
CCDC8-201ENST00000307522 IL1RAPL1Q9NZN1 696 aa16.83■□□□□ 0.29
CCDC8-201ENST00000307522 A0A088AWK7 358 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 SGK1O00141 431 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 ARIH2O95376 493 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 MT-ND3P03897 115 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 CD1EP15812 388 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 GLRA2P23416 452 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 CA8P35219 290 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 RAP1GDS1P52306 607 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 HIC1Q14526 733 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 ANKRD20A4Q4UJ75 823 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 TMEM259Q4ZIN3 620 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 TAS1R2Q8TE23 839 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 GRK7Q8WTQ7 553 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 ZNF512Q96ME7 567 aaPredicted RBP16.83■□□□□ 0.28
CCDC8-201ENST00000307522 C20orf27Q9GZN8 174 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 HOXC10Q9NYD6 342 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 CLUHO75153 1309 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 LSM1O15116 133 aaKnown RBP16.83■□□□□ 0.28
CCDC8-201ENST00000307522 SERPINB8P50452 374 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 CCNIQ14094 377 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 TMEM132AQ24JP5 1023 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 ZNF394Q53GI3 561 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 EFHC1Q5JVL4 640 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 FNBP1LQ5T0N5 605 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 KREMEN1Q96MU8 473 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 TARS2Q9BW92 718 aaKnown RBP16.83■□□□□ 0.28
CCDC8-201ENST00000307522 SELENONQ9NZV5 590 aa16.83■□□□□ 0.28
CCDC8-201ENST00000307522 SSC5DA1L4H1 1573 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 SPTLC1O15269 473 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 HNRNPCL1O60812 293 aaKnown RBP16.82■□□□□ 0.28
CCDC8-201ENST00000307522 PAX3P23760 479 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 SNRNP35Q16560 246 aaKnown RBP16.82■□□□□ 0.28
CCDC8-201ENST00000307522 C6orf183Q5T699 404 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 ITPRIPL1Q6GPH6 555 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 SLC15A3Q8IY34 581 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 LMO3Q8TAP4 145 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 GIPC3Q8TF64 312 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 PYROXD1Q8WU10 500 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 ACCSQ96QU6 501 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 SLX1AQ9BQ83 275 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 SENP7Q9BQF6 1050 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 PORCNQ9H237 461 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 SMIM31A0A1B0GVY4 71 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 TRMUO75648 421 aaKnown RBP16.82■□□□□ 0.28
CCDC8-201ENST00000307522 RPL5P46777 297 aaKnown RBP16.82■□□□□ 0.28
CCDC8-201ENST00000307522 BST1Q10588 318 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 BMPR2Q13873 1038 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 XXYLT1Q8NBI6 393 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 TBX20Q9UMR3 447 aa16.82■□□□□ 0.28
CCDC8-201ENST00000307522 TCRBV7S3A2A0A539 114 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 E2F8A0AVK6 867 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 SOWAHBA6NEL2 793 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 SLC16A3O15427 465 aaKnown RBP16.81■□□□□ 0.28
CCDC8-201ENST00000307522 PLA2G6O60733 806 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 LYPLA1O75608 230 aaPredicted RBP16.81■□□□□ 0.28
CCDC8-201ENST00000307522 CFHP08603 1231 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 TNNI1P19237 187 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 HOXD12P35452 270 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 GJA8P48165 433 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 MTTPP55157 894 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 FAAP100Q0VG06 881 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 LPIN1Q14693 890 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 ZNF362Q5T0B9 420 aaPredicted RBP16.81■□□□□ 0.28
CCDC8-201ENST00000307522 TMEM53Q6P2H8 277 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 POLNQ7Z5Q5 900 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 CTAGE3PQ8IX95 158 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 VPS33BQ9H267 617 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 NOCTQ9UK39 431 aaKnown RBP16.81■□□□□ 0.28
CCDC8-201ENST00000307522 KPNA1P52294 538 aaPredicted RBP16.81■□□□□ 0.28
CCDC8-201ENST00000307522 STXBP2Q15833 593 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 SLC39A4Q6P5W5 647 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 TMEM161BQ8NDZ6 487 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 PLVAPQ9BX97 442 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 PCDH18Q9HCL0 1135 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 DTNAQ9Y4J8 743 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 NDUFB5O43674 189 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 EDN1P05305 212 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 UBA1P22314 1058 aaKnown RBP16.81■□□□□ 0.28
CCDC8-201ENST00000307522 NFKBIAP25963 317 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 OXCT1P55809 520 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 ATP1A4Q13733 1029 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 CHI3L2Q15782 390 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 CNGA3Q16281 694 aa16.81■□□□□ 0.28
CCDC8-201ENST00000307522 UTS2BQ765I0 119 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms