RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PDE8BO95263 885 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 CALB2P22676 271 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 USP21Q9UK80 565 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 TNNI3P19429 210 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 AGKQ53H12 422 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 BMP10O95393 424 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 MYBP10242 640 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 STARD3Q14849 445 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 DEFB107AQ8IZN7 70 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 ZSCAN18Q8TBC5 510 aaPredicted RBP13.78□□□□□ -0.2
TRIM56-201ENST00000306085 DCLRE1BQ9H816 532 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 RBM12Q9NTZ6 932 aaKnown RBP13.78□□□□□ -0.2
TRIM56-201ENST00000306085 ADGRG1Q9Y653 693 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 PRG2P13727 222 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 FASP25445 335 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 RASA2Q15283 850 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 TPRKBQ9Y3C4 175 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 CYP21A2P08686 494 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 AP1S1P61966 158 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 BIKQ13323 160 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 KYAT1Q16773 422 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 RGS21Q2M5E4 152 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 LRRC17Q8N6Y2 441 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 RIN2Q8WYP3 895 aaPredicted RBP13.77□□□□□ -0.2
TRIM56-201ENST00000306085 USP7Q93009 1102 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 RP1L1Q8IWN7 2480 aaPredicted RBP13.77□□□□□ -0.2
TRIM56-201ENST00000306085 ZBTB5O15062 677 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 SEMA3FQ13275 785 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 SWI5Q1ZZU3 235 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 MTDHQ86UE4 582 aaKnown RBP13.77□□□□□ -0.2
TRIM56-201ENST00000306085 PDHBP11177 359 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 DLG1Q12959 904 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 MTSS1LQ765P7 747 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 PIGKQ92643 395 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 LNPEPQ9UIQ6 1025 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 MYRFQ9Y2G1 1151 aa13.77□□□□□ -0.2
TRIM56-201ENST00000306085 ATF4P18848 351 aaPredicted RBP13.77□□□□□ -0.21
TRIM56-201ENST00000306085 ADD2P35612 726 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
TRIM56-201ENST00000306085 CYP4F2P78329 520 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 CYP4F3Q08477 520 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 MAP4K1Q92918 833 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 PTPRHQ9HD43 1115 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 MGAT4AQ9UM21 535 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 STK4Q13043 487 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 MFSD14CQ5VZR4 134 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 KRT33AO76009 404 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 HIST1H2ABP04908 130 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 HIST3H2AQ7L7L0 130 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 PPIL6Q8IXY8 311 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 HIST1H2ACQ93077 130 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 FAM50BQ9Y247 325 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 C2CD2LO14523 706 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 NCAM1P13591 858 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 FAM20CQ8IXL6 584 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 PMM1Q92871 262 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 CELF4Q9BZC1 486 aaKnown RBP13.77□□□□□ -0.21
TRIM56-201ENST00000306085 GRIP2Q9C0E4 1043 aa13.77□□□□□ -0.21
TRIM56-201ENST00000306085 ITIH6Q6UXX5 1313 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 LRPAP1P30533 357 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 CASP5P51878 434 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 AQP5P55064 265 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 S100ZQ8WXG8 99 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 CCDC126Q96EE4 140 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 YME1L1Q96TA2 773 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 UNKQ9C0B0 810 aaKnown RBP13.76□□□□□ -0.21
TRIM56-201ENST00000306085 RACGAP1Q9H0H5 632 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 TSPAN4O14817 238 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 PAX7P23759 505 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 C3orf20Q8ND61 904 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 PUS3Q9BZE2 481 aaKnown RBP13.76□□□□□ -0.21
TRIM56-201ENST00000306085 LEMD3Q9Y2U8 911 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 NPR3P17342 541 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 ADSLP30566 484 aaPredicted RBP13.76□□□□□ -0.21
TRIM56-201ENST00000306085 GMFBP60983 142 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 PSMA8Q8TAA3 256 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 TBC1D22BQ9NU19 505 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 GSTK1Q9Y2Q3 226 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 RPS6KL1Q9Y6S9 549 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 ALDH1A3P47895 512 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 ITIH4Q14624 930 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 MAGEB18Q96M61 343 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 TRIT1Q9H3H1 467 aaKnown RBP13.76□□□□□ -0.21
TRIM56-201ENST00000306085 TAGLN3Q9UI15 199 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 SNX9Q9Y5X1 595 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 MYH3P11055 1940 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 RAD51CO43502 376 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 HSD17B3P37058 310 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 PACS1Q6VY07 963 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 CLPBQ9H078 707 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 JMJD4Q9H9V9 463 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 SPTLC1O15269 473 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 PLA2G6O60733 806 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 NCK1P16333 377 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 IFNGR2P38484 337 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 MTF1Q14872 753 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 NR6A1Q15406 480 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms