RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TRPM5Q9NZQ8 1165 aa28.43■■■□□ 2.14
HDAC3-201ENST00000305264 SCINQ9Y6U3 715 aa28.43■■■□□ 2.14
HDAC3-201ENST00000305264 SIGLEC16A6NMB1 481 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 ABL1P00519 1130 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 FLT3P36888 993 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 YWHAZP63104 245 aaKnown RBP28.42■■■□□ 2.14
HDAC3-201ENST00000305264 CYP4F8P98187 520 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 SKIV2LQ15477 1246 aaKnown RBP28.42■■■□□ 2.14
HDAC3-201ENST00000305264 TRNP1Q6NT89 227 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 TRIM7Q9C029 511 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 POPDC2Q9HBU9 364 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 PPP2R2CQ9Y2T4 447 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 PRSS36Q5K4E3 855 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 ARHGAP18Q8N392 663 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 SHKBP1Q8TBC3 707 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 GOLGA1Q92805 767 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 COG5Q9UP83 839 aa28.42■■■□□ 2.14
HDAC3-201ENST00000305264 MOSPD3O75425 235 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 GLI1P08151 1106 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 CDC25CP30307 473 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 RFC1P35251 1148 aaPredicted RBP28.41■■■□□ 2.14
HDAC3-201ENST00000305264 ITIH3Q06033 890 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 LEMD2Q8NC56 503 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 RFFLQ8WZ73 363 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 SLC2A13Q96QE2 648 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 ATXN3LQ9H3M9 355 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 OSGEPQ9NPF4 335 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 CTTNBP2NLQ9P2B4 639 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 TRIM10Q9UDY6 481 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 NUDT5Q9UKK9 219 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 NAALADL1Q9UQQ1 740 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 DUSP10Q9Y6W6 482 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 H3BQ06 376 aaPredicted RBP28.41■■■□□ 2.14
HDAC3-201ENST00000305264 DAB1O75553 588 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 SNX30Q5VWJ9 437 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 BTBD8Q5XKL5 378 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 SMRP1Q8NCR6 262 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 GCNAQ96QF7 691 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 CCSER2Q9H7U1 834 aa28.41■■■□□ 2.14
HDAC3-201ENST00000305264 UBE2ZQ9H832 354 aaPredicted RBP28.41■■■□□ 2.14
HDAC3-201ENST00000305264 MRPL47Q9HD33 250 aaKnown RBP28.41■■■□□ 2.14
HDAC3-201ENST00000305264 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.41■■■□□ 2.14
HDAC3-201ENST00000305264 PJA2O43164 708 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 PPP3CCP48454 512 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 PSEN1P49768 467 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 STXBP5Q5T5C0 1151 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 SYPL2Q5VXT5 272 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 DCUN1D2Q6PH85 259 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 DEFB106AQ8N104 65 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 SLC35G2Q8TBE7 412 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 ABCC13Q9NSE7 274 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 CLIC5Q9NZA1 410 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 SALL4Q9UJQ4 1053 aa28.4■■■□□ 2.14
HDAC3-201ENST00000305264 C2orf78A6NCI8 922 aa28.39■■■□□ 2.14
HDAC3-201ENST00000305264 NCAM1P13591 858 aa28.39■■■□□ 2.14
HDAC3-201ENST00000305264 RARGP13631 454 aa28.39■■■□□ 2.14
HDAC3-201ENST00000305264 CES5AQ6NT32 575 aa28.39■■■□□ 2.14
HDAC3-201ENST00000305264 ZNF564Q8TBZ8 553 aaPredicted RBP28.39■■■□□ 2.14
HDAC3-201ENST00000305264 FGF19O95750 216 aa28.39■■■□□ 2.13
HDAC3-201ENST00000305264 KCNA5P22460 613 aa28.39■■■□□ 2.13
HDAC3-201ENST00000305264 DCAF6Q58WW2 860 aa28.39■■■□□ 2.13
HDAC3-201ENST00000305264 TXNDC8Q6A555 127 aa28.39■■■□□ 2.13
HDAC3-201ENST00000305264 ITFG1Q8TB96 612 aa28.39■■■□□ 2.13
HDAC3-201ENST00000305264 UVRAGQ9P2Y5 699 aa28.39■■■□□ 2.13
HDAC3-201ENST00000305264 DENND4AQ7Z401 1863 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.38■■■□□ 2.13
HDAC3-201ENST00000305264 TMEM191CA6NGB0 347 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 C2CD4BA6NLJ0 364 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 CAPN9O14815 690 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 TLR5O60602 858 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 OGDHQ02218 1023 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 TEAD2Q15562 447 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 ARCQ7LC44 396 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 ING5Q8WYH8 240 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 MRPS31Q92665 395 aaKnown RBP28.38■■■□□ 2.13
HDAC3-201ENST00000305264 TRIM44Q96DX7 344 aaPredicted RBP28.38■■■□□ 2.13
HDAC3-201ENST00000305264 BTBD6Q96KE9 485 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 TRPC7Q9HCX4 862 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 WDR6Q9NNW5 1121 aaKnown RBP28.38■■■□□ 2.13
HDAC3-201ENST00000305264 CD207Q9UJ71 328 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 MRPS23Q9Y3D9 190 aaKnown RBP28.38■■■□□ 2.13
HDAC3-201ENST00000305264 CLUHO75153 1309 aa28.38■■■□□ 2.13
HDAC3-201ENST00000305264 TBX18O95935 607 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 CEBPBP17676 345 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 MATKP42679 507 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 PITX1P78337 314 aaPredicted RBP28.37■■■□□ 2.13
HDAC3-201ENST00000305264 KIF5AQ12840 1032 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 RHOT2Q8IXI1 618 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 RXFP2Q8WXD0 754 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 CFAP57Q96MR6 1250 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.37■■■□□ 2.13
HDAC3-201ENST00000305264 ANAPC7Q9UJX3 599 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 COL6A3P12111 3177 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 OAS1P00973 400 aaKnown RBP28.37■■■□□ 2.13
HDAC3-201ENST00000305264 RALAP11233 206 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 ARHGAP25P42331 645 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 HS1BP3Q53T59 392 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 ATAT1Q5SQI0 421 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 HECTD3Q5T447 861 aa28.37■■■□□ 2.13
HDAC3-201ENST00000305264 RSRC2Q7L4I2 434 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms