RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 SGO2Q562F6 1265 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 LY6G5CQ5SRR4 150 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 ARHGAP17Q68EM7 881 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 NUDT18Q6ZVK8 323 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 RSRC2Q7L4I2 434 aaKnown RBP11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 SYT13Q7L8C5 426 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 CCDC186Q7Z3E2 898 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 BBS7Q8IWZ6 715 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 ARHGAP18Q8N392 663 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 PPM1KQ8N3J5 372 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 TSTD1Q8NFU3 115 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 NT5C1BQ96P26 610 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 NMUR1Q9HB89 426 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 CHMP5Q9NZZ3 219 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 RASAL2Q9UJF2 1139 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 DNMT3LQ9UJW3 386 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 NUDT5Q9UKK9 219 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 GVINP1Q7Z2Y8 2422 aa11.44□□□□□ -0.58
HMGN1P35-201ENST00000303758 CCDC163A0A0D9SF12 145 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 MDM4O15151 490 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 AXIN1O15169 862 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 KAT7O95251 611 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 FGFR1OPO95684 399 aaKnown RBP11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 RETP07949 1114 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 HOXC13P31276 330 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 ANP32AP39687 249 aaKnown RBP11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 SLC6A11P48066 632 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 PGFP49763 221 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 SPEM2Q0P670 501 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 BST2Q10589 180 aaKnown RBP11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 GAB4Q2WGN9 574 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 TTI2Q6NXR4 508 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 RHBDF2Q6PJF5 856 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 C12orf40Q86WS4 652 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 TTC30AQ86WT1 665 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 MIB1Q86YT6 1006 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 NAT16Q8N8M0 369 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 ANKRD52Q8NB46 1076 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 USP33Q8TEY7 942 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 GAB3Q8WWW8 586 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 EZH1Q92800 747 aaPredicted RBP11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 DUSP9Q99956 384 aaKnown RBP11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 KLF16Q9BXK1 252 aaPredicted RBP11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 LRRC4Q9HBW1 653 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 SPHK2Q9NRA0 654 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 POLR3BQ9NW08 1133 aaPredicted RBP11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 OSER1Q9NX31 292 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 DEC1Q9P2X7 70 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 TSPAN16Q9UKR8 245 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 PCDHB4Q9Y5E5 795 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 SPTBN4Q9H254 2564 aa11.43□□□□□ -0.58
HMGN1P35-201ENST00000303758 PTPRZ1P23471 2315 aaPredicted RBP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 OTOGLQ3ZCN5 2332 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 DCHS1Q96JQ0 3298 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 TBC1D3BA6NDS4 549 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 NEDD8-MDP1E9PL57 170 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 K7EQS6 105 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 P4HA2O15460 535 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 HOXC11O43248 304 aaPredicted RBP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 HMBSP08397 361 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 VDRP11473 427 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 BMP6P22004 513 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 TIE1P35590 1138 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 GRIA2P42262 883 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 PLA2G4AP47712 749 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 TKTL1P51854 596 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 DGKEP52429 567 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 YWHAGP61981 247 aaKnown RBP eCLIP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 MRPS21P82921 87 aaKnown RBP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 LMNB2Q03252 620 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 EFEMP1Q12805 493 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 CAMK4Q16566 473 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 KLHDC10Q6PID8 442 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 FOXR2Q6PJQ5 311 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 TMEM270Q6UE05 265 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 TPGS1Q6ZTW0 290 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 CACNA2D4Q7Z3S7 1137 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 PIGZQ86VD9 579 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 CREBRFQ8IUR6 639 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 SIX6OS1Q8N1H7 587 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 CCDC33Q8N5R6 958 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 FAM160A2Q8N612 972 aaPredicted RBP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 TRIML1Q8N9V2 468 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 XPO6Q96QU8 1125 aaKnown RBP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 BBS2Q9BXC9 721 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 UBXN6Q9BZV1 441 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 DNAJC17Q9NVM6 304 aaKnown RBP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 CLIC5Q9NZA1 410 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 STRIP2Q9ULQ0 834 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 MMP17Q9ULZ9 603 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 USP3Q9Y6I4 520 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 DNAH14Q0VDD8 3507 aa11.42□□□□□ -0.58
HMGN1P35-201ENST00000303758 SPAG17Q6Q759 2223 aa11.41□□□□□ -0.58
HMGN1P35-201ENST00000303758 PRR5-ARHGAP8B1AHC4 643 aa11.41□□□□□ -0.58
HMGN1P35-201ENST00000303758 XPO1O14980 1071 aaKnown RBP11.41□□□□□ -0.58
HMGN1P35-201ENST00000303758 PMM2O15305 246 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms