RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 RSRC2Q7L4I2 434 aaKnown RBP25.66■■□□□ 1.7
HOXC9-201ENST00000303450 TADA2BQ86TJ2 420 aa25.66■■□□□ 1.7
HOXC9-201ENST00000303450 XYLT1Q86Y38 959 aa25.66■■□□□ 1.7
HOXC9-201ENST00000303450 SMARCD2Q92925 531 aa25.66■■□□□ 1.7
HOXC9-201ENST00000303450 CCDC42Q96M95 316 aa25.66■■□□□ 1.7
HOXC9-201ENST00000303450 CDK5RAP1Q96SZ6 601 aaKnown RBP25.66■■□□□ 1.7
HOXC9-201ENST00000303450 NHEJ1Q9H9Q4 299 aaPredicted RBP25.66■■□□□ 1.7
HOXC9-201ENST00000303450 ABCC13Q9NSE7 274 aa25.66■■□□□ 1.7
HOXC9-201ENST00000303450 STRIP2Q9ULQ0 834 aa25.66■■□□□ 1.7
HOXC9-201ENST00000303450 EFHC1Q5JVL4 640 aa25.65■■□□□ 1.7
HOXC9-201ENST00000303450 OLFML1Q6UWY5 402 aa25.65■■□□□ 1.7
HOXC9-201ENST00000303450 ARID3BQ8IVW6 561 aaPredicted RBP25.65■■□□□ 1.7
HOXC9-201ENST00000303450 EDEM1Q92611 657 aa25.65■■□□□ 1.7
HOXC9-201ENST00000303450 ASB16Q96NS5 453 aa25.65■■□□□ 1.7
HOXC9-201ENST00000303450 SLC22A12Q96S37 553 aa25.65■■□□□ 1.7
HOXC9-201ENST00000303450 RNF38Q9H0F5 515 aa25.65■■□□□ 1.7
HOXC9-201ENST00000303450 A0A087X0T9 212 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 LOC730098B7Z3J9 87 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 COCHO43405 550 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 AKR1B10O60218 316 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 RTN2O75298 545 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 FAM228BP0C875 321 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 ATP5C1P36542 298 aaKnown RBP25.64■■□□□ 1.7
HOXC9-201ENST00000303450 ZP2Q05996 745 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 C1QBPQ07021 282 aaKnown RBP25.64■■□□□ 1.7
HOXC9-201ENST00000303450 ZNF268Q14587 947 aaPredicted RBP25.64■■□□□ 1.7
HOXC9-201ENST00000303450 C10orf120Q5SQS8 335 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 MON1BQ7L1V2 547 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 ZDHHC14Q8IZN3 488 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 ZNF276Q8N554 614 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 RNF139Q8WU17 664 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 PIWIL1Q96J94 861 aaKnown RBP25.64■■□□□ 1.7
HOXC9-201ENST00000303450 TRIM62Q9BVG3 475 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 NUDT5Q9UKK9 219 aa25.64■■□□□ 1.7
HOXC9-201ENST00000303450 GOLGA8SH3BPF8 625 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 TBX18O95935 607 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 FTLP02792 175 aaPredicted RBP25.63■■□□□ 1.69
HOXC9-201ENST00000303450 GLI1P08151 1106 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 MBL2P11226 248 aaPredicted RBP25.63■■□□□ 1.69
HOXC9-201ENST00000303450 WEE1P30291 646 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 YWHAZP63104 245 aaKnown RBP25.63■■□□□ 1.69
HOXC9-201ENST00000303450 PTP4A2Q12974 167 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 TAF5Q15542 800 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 TJAP1Q5JTD0 557 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 FAM102AQ5T9C2 384 aaPredicted RBP25.63■■□□□ 1.69
HOXC9-201ENST00000303450 MTSS1LQ765P7 747 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 MCOLN2Q8IZK6 566 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 SMG9Q9H0W8 520 aaKnown RBP25.63■■□□□ 1.69
HOXC9-201ENST00000303450 POPDC2Q9HBU9 364 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 ASNSD1Q9NWL6 643 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 WDR35Q9P2L0 1181 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 UNC80Q8N2C7 3258 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 CAPN9O14815 690 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 HSF2BPO75031 334 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 OLFM2O95897 454 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 NCAM1P13591 858 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 GSDMDP57764 484 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 SLC18A3Q16572 532 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 CCDC122Q5T0U0 273 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 ALKBH5Q6P6C2 394 aaKnown RBP25.63■■□□□ 1.69
HOXC9-201ENST00000303450 SLC26A9Q7LBE3 791 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 PHLDB2Q86SQ0 1253 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 ST13P5Q8NFI4 369 aaPredicted RBP25.63■■□□□ 1.69
HOXC9-201ENST00000303450 VCPIP1Q96JH7 1222 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 ZFP14Q9HCL3 533 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 OLA1Q9NTK5 396 aaKnown RBP25.63■■□□□ 1.69
HOXC9-201ENST00000303450 TDP1Q9NUW8 608 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 LIMD1Q9UGP4 676 aa25.63■■□□□ 1.69
HOXC9-201ENST00000303450 NUP210Q8TEM1 1887 aaPredicted RBP25.62■■□□□ 1.69
HOXC9-201ENST00000303450 DPYSL4O14531 572 aa25.62■■□□□ 1.69
HOXC9-201ENST00000303450 GRAP2O75791 330 aa25.62■■□□□ 1.69
HOXC9-201ENST00000303450 SCNN1AP37088 669 aa25.62■■□□□ 1.69
HOXC9-201ENST00000303450 GFPT1Q06210 699 aaPredicted RBP25.62■■□□□ 1.69
HOXC9-201ENST00000303450 ASTE1Q2TB18 679 aaPredicted RBP25.62■■□□□ 1.69
HOXC9-201ENST00000303450 KLHDC10Q6PID8 442 aa25.62■■□□□ 1.69
HOXC9-201ENST00000303450 PARM1Q6UWI2 310 aa25.62■■□□□ 1.69
HOXC9-201ENST00000303450 ISCUQ9H1K1 167 aa25.62■■□□□ 1.69
HOXC9-201ENST00000303450 TRPV4Q9HBA0 871 aa25.62■■□□□ 1.69
HOXC9-201ENST00000303450 DNMT3LQ9UJW3 386 aa25.62■■□□□ 1.69
HOXC9-201ENST00000303450 PRAMEF12O95522 483 aa25.61■■□□□ 1.69
HOXC9-201ENST00000303450 VIPR2P41587 438 aa25.61■■□□□ 1.69
HOXC9-201ENST00000303450 RNASE9P60153 205 aaKnown RBP25.61■■□□□ 1.69
HOXC9-201ENST00000303450 SLC7A9P82251 487 aa25.61■■□□□ 1.69
HOXC9-201ENST00000303450 EFEMP1Q12805 493 aa25.61■■□□□ 1.69
HOXC9-201ENST00000303450 BEND5Q7L4P6 421 aa25.61■■□□□ 1.69
HOXC9-201ENST00000303450 DNAAF5Q86Y56 855 aa25.61■■□□□ 1.69
HOXC9-201ENST00000303450 USP13Q92995 863 aaPredicted RBP25.61■■□□□ 1.69
HOXC9-201ENST00000303450 NAALADL1Q9UQQ1 740 aa25.61■■□□□ 1.69
HOXC9-201ENST00000303450 CPQQ9Y646 472 aa25.61■■□□□ 1.69
HOXC9-201ENST00000303450 FYNP06241 537 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 TANGO2Q6ICL3 276 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 TMTC1Q8IUR5 882 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 CELF5Q8N6W0 485 aaKnown RBP25.6■■□□□ 1.69
HOXC9-201ENST00000303450 FGF14Q92915 247 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 E2F7Q96AV8 911 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 TRIM11Q96F44 468 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 SMPD4Q9NXE4 827 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 RASAL2Q9UJF2 1139 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 ARHGAP26Q9UNA1 814 aa25.6■■□□□ 1.69
HOXC9-201ENST00000303450 CCL26Q9Y258 94 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms