RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 TMEM109Q9BVC6 243 aa11.05□□□□□ -0.64
CLP1-201ENST00000302731 TRIM62Q9BVG3 475 aa11.05□□□□□ -0.64
CLP1-201ENST00000302731 PHACTR1Q9C0D0 580 aa11.05□□□□□ -0.64
CLP1-201ENST00000302731 EPB41L4BQ9H329 900 aa11.05□□□□□ -0.64
CLP1-201ENST00000302731 FAM204AQ9H8W3 233 aa11.05□□□□□ -0.64
CLP1-201ENST00000302731 DMAP1Q9NPF5 467 aaPredicted RBP11.05□□□□□ -0.64
CLP1-201ENST00000302731 AAASQ9NRG9 546 aa11.05□□□□□ -0.64
CLP1-201ENST00000302731 TBC1D13Q9NVG8 400 aa11.05□□□□□ -0.64
CLP1-201ENST00000302731 CFAP69A5D8W1 941 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 SGK1O00141 431 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 ENPP3O14638 875 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 APOL1O14791 398 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 SYN3O14994 580 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 HOXA2O43364 376 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 NBNO60934 754 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 DDHD2O94830 711 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 OAZ2O95190 189 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 RBP3P10745 1247 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 L1CAMP32004 1257 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 NR2C2P49116 596 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 SULT1E1P49888 294 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 EIF3EP60228 445 aaKnown RBP11.04□□□□□ -0.64
CLP1-201ENST00000302731 DYNLT1P63172 113 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 YWHAHQ04917 246 aaPredicted RBP11.04□□□□□ -0.64
CLP1-201ENST00000302731 GPNMBQ14956 572 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 MORF4L2Q15014 288 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 P3H1Q32P28 736 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 RAB6CQ53S08 254 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 TTMPQ5BVD1 217 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 AGBL2Q5U5Z8 902 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 PM20D1Q6GTS8 502 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 C4orf50Q6ZRC1 276 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 HOOK3Q86VS8 718 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 RSAD2Q8WXG1 361 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 ARL8AQ96BM9 186 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 HAUS1Q96CS2 278 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 ATP6V1G3Q96LB4 118 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 TMEM121Q9BTD3 319 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 RAB6CQ9H0N0 254 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 TPX2Q9ULW0 747 aaKnown RBP11.04□□□□□ -0.64
CLP1-201ENST00000302731 AP4E1Q9UPM8 1137 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 SHOC2Q9UQ13 582 aa11.04□□□□□ -0.64
CLP1-201ENST00000302731 COL4A4P53420 1690 aaPredicted RBP11.04□□□□□ -0.64
CLP1-201ENST00000302731 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.03□□□□□ -0.64
CLP1-201ENST00000302731 I3L4J1 428 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 RIPK2O43353 540 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 ZBED1O96006 694 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 PECAM1P16284 738 aaPredicted RBP11.03□□□□□ -0.64
CLP1-201ENST00000302731 TFE3P19532 575 aaPredicted RBP11.03□□□□□ -0.64
CLP1-201ENST00000302731 YY1P25490 414 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 NDUFV1P49821 464 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 BCAR1P56945 870 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 MMRN1Q13201 1228 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 KCTD19Q17RG1 926 aaPredicted RBP11.03□□□□□ -0.64
CLP1-201ENST00000302731 PAN2Q504Q3 1202 aaKnown RBP11.03□□□□□ -0.64
CLP1-201ENST00000302731 DCAF6Q58WW2 860 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 ZC3H12AQ5D1E8 599 aaKnown RBP11.03□□□□□ -0.64
CLP1-201ENST00000302731 ANKRD33Q7Z3H0 272 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 ZNF280BQ86YH2 543 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 ZCCHC9Q8N567 271 aaKnown RBP11.03□□□□□ -0.64
CLP1-201ENST00000302731 PQLC3Q8N755 202 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 PLD5Q8N7P1 536 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 DBF4BQ8NFT6 615 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 OR10T2Q8NGX3 314 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 PCDH19Q8TAB3 1148 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 NTAN1Q96AB6 310 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 FAM193BQ96PV7 902 aaPredicted RBP11.03□□□□□ -0.64
CLP1-201ENST00000302731 KCNK16Q96T55 309 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 ADAM33Q9BZ11 813 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 ADAM7Q9H2U9 754 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 SEMA4AQ9H3S1 761 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 TMEM51Q9NW97 253 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 MTMR10Q9NXD2 777 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 FZD10Q9ULW2 581 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 PCDHB7Q9Y5E2 793 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 USP3Q9Y6I4 520 aa11.03□□□□□ -0.64
CLP1-201ENST00000302731 BCLAF3A2AJT9 711 aaKnown RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 NRP1O14786 923 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 CAPN9O14815 690 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 F9P00740 461 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 CXCL10P02778 98 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 LTFP02788 710 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 ITGB1P05556 798 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 FYNP06241 537 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 CYP2F1P24903 491 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 VPS41P49754 854 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 ZNF135P52742 658 aaPredicted RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 HTRA3P83110 453 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 ROR1Q01973 937 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 RNASELQ05823 741 aaKnown RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 IFFO1Q0D2I5 559 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 GPS1Q13098 491 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 XRCC4Q13426 336 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 SLC29A2Q14542 456 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 CA9Q16790 459 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 RNASEH2BQ5TBB1 312 aaKnown RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 C1orf53Q5VUE5 145 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 OTUD1Q5VV17 481 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms