RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 RRN3P2A6NIE6 340 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 DNALI1O14645 258 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 RIPK2O43353 540 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ENTPD3O75355 529 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CYP19A1P11511 503 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 JAK1P23458 1154 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 PIK3R1P27986 724 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 EIF2B2P49770 351 aaKnown RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CCNG1P51959 295 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 KPNA1P52294 538 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SPANXN3Q5MJ09 141 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ATP6V0D2Q8N8Y2 350 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ZMYM2Q9UBW7 1377 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CYP2C9P11712 490 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 HERVK_113P62684 666 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TGM3Q08188 693 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 Q4G0T1 1027 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ERCC6L2Q5T890 1561 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 DENND5BQ6ZUT9 1274 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ULK2Q8IYT8 1036 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TMC2Q8TDI7 906 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 APOL5Q9BWW9 433 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SNX9Q9Y5X1 595 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CYP27B1O15528 508 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SLC1A6P48664 564 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 PTPAQ15257 358 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 PDZK1Q5T2W1 519 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SCARA3Q6AZY7 606 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CDC73Q6P1J9 531 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CHST13Q8NET6 341 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 ENKURQ8TC29 256 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 BTN2A2Q8WVV5 523 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 TINF2Q9BSI4 451 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 UBDO15205 165 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 BMP10O95393 424 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 GH1P01241 217 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 IL6P05231 212 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SARSP49591 514 aaKnown RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SERPINH1P50454 418 aaKnown RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SFSWAPQ12872 951 aaKnown RBP7.87□□□□□ -1.15
SF3B3-201ENST00000302516 GSTA3Q16772 222 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 STRIP1Q5VSL9 837 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 OR8H2Q8N162 312 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 CGRRF1Q99675 332 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 OSBPL10Q9BXB5 764 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 EMILIN2Q9BXX0 1053 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 RRN3Q9NYV6 651 aa7.87□□□□□ -1.15
SF3B3-201ENST00000302516 SPATA31A3Q5VYP0 1347 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 FAM220BPB1ANY3 271 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 F8W810 466 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 NR5A2O00482 541 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 TRDMT1O14717 391 aaKnown RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 AHCYL1O43865 530 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 PPP2R1BP30154 601 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CPA2P48052 419 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MGAT5Q09328 741 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 GALNTL6Q49A17 601 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 TTI2Q6NXR4 508 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 DHFR2Q86XF0 187 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 DEFB107AQ8IZN7 70 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 C2orf69Q8N8R5 385 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 REPS1Q96D71 796 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CYP3A43Q9HB55 503 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 VANGL2Q9ULK5 521 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 KLHL20Q9Y2M5 609 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 HACD1B0YJ81 288 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 KRT34O76011 436 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ACOT2P49753 483 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CCT8P50990 548 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 SLC45A4Q5BKX6 768 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 TMEM26Q6ZUK4 368 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CLUHO75153 1309 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 IFT172Q9UG01 1749 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 DIP2CQ9Y2E4 1556 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 A0A087X1B8 175 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 WFS1O76024 890 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ATP6V1B2P21281 511 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 PTPN7P35236 360 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 C21orf59P57076 290 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ANTXR2P58335 489 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ZNF844Q08AG5 666 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ACAP1Q15027 740 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 S100ZQ8WXG8 99 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 SRPK1Q96SB4 655 aaKnown RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CRLS1Q9UJA2 301 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MOSPD1Q9UJG1 213 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MYH13Q9UKX3 1938 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 PHGDHO43175 533 aaKnown RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 NAMPTP43490 491 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MSLNQ13421 630 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 PCSK7Q16549 785 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 STRA8Q7Z7C7 330 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MYO1HQ8N1T3 1032 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 MREGQ8N565 214 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 ZCCHC9Q8N567 271 aaKnown RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 OR6J1Q8NGC5 347 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 NMD3Q96D46 503 aaKnown RBP7.86□□□□□ -1.15
SF3B3-201ENST00000302516 NRDE2Q9H7Z3 1164 aa7.86□□□□□ -1.15
SF3B3-201ENST00000302516 CYP39A1Q9NYL5 469 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms