RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 STAT2P52630 851 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 DPYSL3Q14195 570 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 CRY2Q49AN0 593 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 SH3D19Q5HYK7 790 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 BBS12Q6ZW61 710 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 DEFB132Q7Z7B7 95 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 USP37Q86T82 979 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 CCDC33Q8N5R6 958 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 ARFGAP1Q8N6T3 406 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 TRIM56Q9BRZ2 755 aaKnown RBP11.29□□□□□ -0.6
ZNF558-201ENST00000301475 PACSIN3Q9UKS6 424 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 DMTF1Q9Y222 760 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 TELO2Q9Y4R8 837 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 LY75O60449 1722 aa11.29□□□□□ -0.6
ZNF558-201ENST00000301475 A0A1B0GTW7 788 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 HMX2A2RU54 273 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 CSDE1O75534 798 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 KRT37O76014 449 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 GSRP00390 522 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 CSH1P0DML2 217 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 CSH2P0DML3 217 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 SLC25A11Q02978 314 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 CYLC2Q14093 348 aaPredicted RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 DBN1Q16643 649 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 CYP4A22Q5TCH4 519 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 TFB1MQ8WVM0 346 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 IRGQQ8WZA9 623 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 TEKT1Q969V4 418 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 DDX56Q9NY93 547 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 PI4KBQ9UBF8 816 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 ITGA11Q9UKX5 1188 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 DNAJC16Q9Y2G8 782 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 CRTAMO95727 393 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 C4BPAP04003 597 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 ATP5BP06576 529 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 SFSWAPQ12872 951 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 STX3Q13277 289 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 DMP1Q13316 513 aaPredicted RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 DCTN2Q13561 401 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 APOFQ13790 326 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 KCNJ11Q14654 390 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 XKR9Q5GH70 373 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 FRMD7Q6ZUT3 714 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 RSPH3Q86UC2 560 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 MAP7D3Q8IWC1 876 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 RTKN2Q8IZC4 609 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 NLGN1Q8N2Q7 840 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 DIS3LQ8TF46 1054 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 ZNF606Q8WXB4 792 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 PRPF18Q99633 342 aaKnown RBP11.28□□□□□ -0.6
ZNF558-201ENST00000301475 TIMMDC1Q9NPL8 285 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 XPNPEP1Q9NQW7 623 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 AP4B1Q9Y6B7 739 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 ARID2Q68CP9 1835 aa11.28□□□□□ -0.6
ZNF558-201ENST00000301475 STRNO43815 780 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 TOM1L1O75674 476 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 TNNI1P19237 187 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 YWHAZP63104 245 aaKnown RBP11.27□□□□□ -0.6
ZNF558-201ENST00000301475 NDUFAF2Q8N183 169 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 PQLC1Q8N2U9 271 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 HSPBAP1Q96EW2 488 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 CNBD2Q96M20 576 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 MRPL1Q9BYD6 325 aaKnown RBP11.27□□□□□ -0.6
ZNF558-201ENST00000301475 MRPS26Q9BYN8 205 aaKnown RBP11.27□□□□□ -0.6
ZNF558-201ENST00000301475 KMT5AQ9NQR1 393 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 THAP1Q9NVV9 213 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 MKS1Q9NXB0 559 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 COL20A1Q9P218 1284 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 SSX2IPQ9Y2D8 614 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 NUB1Q9Y5A7 615 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 HEMK1Q9Y5R4 338 aaPredicted RBP11.27□□□□□ -0.6
ZNF558-201ENST00000301475 SLX4Q8IY92 1834 aa11.27□□□□□ -0.6
ZNF558-201ENST00000301475 LOC100653049A0A140TA62 436 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ADCY3O60266 1144 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 KRT34O76011 436 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 LYPLA2O95372 231 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 RBP3P10745 1247 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 EIF3EP60228 445 aaKnown RBP11.27□□□□□ -0.61
ZNF558-201ENST00000301475 CNGA3Q16281 694 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 TEDDM1Q5T9Z0 273 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 KLHL35Q6PF15 583 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 IYDQ6PHW0 289 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 HHIPL2Q6UWX4 724 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 KIAA0319LQ8IZA0 1049 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ADGRF2Q8IZF7 708 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 PHTF2Q8N3S3 785 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF513Q8N8E2 541 aaPredicted RBP11.27□□□□□ -0.61
ZNF558-201ENST00000301475 PIWIL2Q8TC59 973 aaKnown RBP11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ZFRQ96KR1 1074 aaKnown RBP11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF696Q9H7X3 374 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 POPDC2Q9HBU9 364 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 PNPLA8Q9NP80 782 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF180Q9UJW8 692 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 LRCH4O75427 683 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 CRKP46108 304 aa11.27□□□□□ -0.61
ZNF558-201ENST00000301475 NLRP11P59045 1033 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms