RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 AARSP49588 968 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMCO4-201ENST00000298966 RBP5P82980 135 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 CYP4F8P98187 520 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 APBA1Q02410 837 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 MTF1Q14872 753 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 VEPH1Q14D04 833 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 ZBTB6Q15916 424 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 TDRD12Q587J7 1177 aaKnown RBP22.23■■□□□ 1.15
SMCO4-201ENST00000298966 TCEAL6Q6IPX3 200 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 FSTL4Q6MZW2 842 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 TOGARAM2Q6ZUX3 1019 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 ARHGEF19Q8IW93 802 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 TTC39CQ8N584 583 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 TCEAL3Q969E4 200 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 KIF12Q96FN5 646 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 CHP1Q99653 195 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 ARHGAP20Q9P2F6 1191 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 HSFX1Q9UBD0 423 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 ADGRG1Q9Y653 693 aa22.23■■□□□ 1.15
SMCO4-201ENST00000298966 USP27XA6NNY8 438 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 TRDMT1O14717 391 aaKnown RBP22.22■■□□□ 1.15
SMCO4-201ENST00000298966 SOAT2O75908 522 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 RHOBTB1O94844 696 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 LCA5LO95447 670 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 TUBB4AP04350 444 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 TYMPP19971 482 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 BPIFB4P59827 614 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 AMPD2Q01433 879 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 FOXC1Q12948 553 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 RUNX3Q13761 415 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 ZNF699Q32M78 642 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 DAB2IPQ5VWQ8 1189 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 HGSNATQ68CP4 663 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 GJB7Q6PEY0 223 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 IRF2BP2Q7Z5L9 587 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 FAM71AQ8IYT1 594 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 TTC9BQ8N6N2 239 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 NIF3L1Q9GZT8 377 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 DUSP15Q9H1R2 295 aaPredicted RBP22.22■■□□□ 1.15
SMCO4-201ENST00000298966 DPP3Q9NY33 737 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 ZMYM5Q9UJ78 669 aa22.22■■□□□ 1.15
SMCO4-201ENST00000298966 KIF2AO00139 706 aaPredicted RBP22.21■■□□□ 1.15
SMCO4-201ENST00000298966 RNF40O75150 1001 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 TUFMP49411 452 aaKnown RBP22.21■■□□□ 1.15
SMCO4-201ENST00000298966 CREB5Q02930 508 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 ZNF252P-AS1Q0IIN9 211 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 CUL2Q13617 745 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 SPA17Q15506 151 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 TAF12Q16514 161 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 ARHGAP44Q17R89 818 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 C10orf76Q5T2E6 689 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 REXO1L1PQ8IX06 675 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 TMEM130Q8N3G9 435 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 LRRC52Q8N7C0 313 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 C1orf127Q8N9H9 656 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 KDF1Q8NAX2 398 aaPredicted RBP22.21■■□□□ 1.15
SMCO4-201ENST00000298966 HHIPQ96QV1 700 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 SEPT5Q99719 369 aaPredicted RBP22.21■■□□□ 1.15
SMCO4-201ENST00000298966 FAM83CQ9BQN1 747 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 SMG9Q9H0W8 520 aaKnown RBP22.21■■□□□ 1.15
SMCO4-201ENST00000298966 ATP8B3O60423 1300 aa22.21■■□□□ 1.15
SMCO4-201ENST00000298966 FASNP49327 2511 aaKnown RBP22.2■■□□□ 1.14
SMCO4-201ENST00000298966 C4orf47A7E2U8 309 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 AKR1B10O60218 316 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 ODC1P11926 461 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 PNPLA4P41247 253 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 MYO1EQ12965 1108 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 ZNF667Q5HYK9 610 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 ZNF662Q6ZS27 426 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 NYAP1Q6ZVC0 841 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 EXOC4Q96A65 974 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 KREMEN1Q96MU8 473 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 LPIN3Q9BQK8 851 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 SLC46A2Q9BY10 475 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 HPS4Q9NQG7 708 aa22.2■■□□□ 1.14
SMCO4-201ENST00000298966 TRMT1Q9NXH9 659 aaKnown RBP22.2■■□□□ 1.14
SMCO4-201ENST00000298966 AJAP1Q9UKB5 411 aaPredicted RBP22.2■■□□□ 1.14
SMCO4-201ENST00000298966 NUP205Q92621 2012 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 ANKRD11Q6UB99 2663 aaPredicted RBP22.19■■□□□ 1.14
SMCO4-201ENST00000298966 FOXN3O00409 490 aaPredicted RBP22.19■■□□□ 1.14
SMCO4-201ENST00000298966 GIPC1O14908 333 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 CST3P01034 146 aaPredicted RBP22.19■■□□□ 1.14
SMCO4-201ENST00000298966 EGFP01133 1207 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 ITGB3P05106 788 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 DRD1P21728 446 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 PAX3P23760 479 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 EIF4A3P38919 411 aaKnown RBP22.19■■□□□ 1.14
SMCO4-201ENST00000298966 KIF11P52732 1056 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 MYL6P60660 151 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 ASTE1Q2TB18 679 aaPredicted RBP22.19■■□□□ 1.14
SMCO4-201ENST00000298966 MGAT5BQ3V5L5 792 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 CMTM8Q8IZV2 173 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 TATDN2Q93075 761 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 ZNF560Q96MR9 790 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 PI4K2AQ9BTU6 479 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 XYLT2Q9H1B5 865 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 EBF3Q9H4W6 596 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 CYP3A43Q9HB55 503 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 IL21Q9HBE4 155 aa22.19■■□□□ 1.14
SMCO4-201ENST00000298966 SIX4Q9UIU6 781 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms