RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 RALAP11233 206 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 GLULP15104 373 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 PLA2G4AP47712 749 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 TUBP50607 506 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ZXDBP98169 803 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 PTK2Q05397 1052 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 RUNX3Q13761 415 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 PDGFRLQ15198 375 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ITPRIPL2Q3MIP1 535 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 PKDCCQ504Y2 493 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ARHGAP18Q8N392 663 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 TMEM105Q8N8V8 129 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 RIN3Q8TB24 985 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 SLC35F5Q8WV83 523 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 OSCP1Q8WVF1 389 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 FAM3CQ92520 227 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 SHC3Q92529 594 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 LINC00597Q9H2U6 94 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 ACP6Q9NPH0 428 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 OSER1Q9NX31 292 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 CFAP97Q9P2B7 532 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 RAPGEFL1Q9UHV5 662 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
HMGB2-201ENST00000296503 WNT6Q9Y6F9 365 aa12.7□□□□□ -0.38
HMGB2-201ENST00000296503 PIK3R2O00459 728 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 ATP8B1O43520 1251 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 DCNP07585 359 aaKnown RBP12.69□□□□□ -0.38
HMGB2-201ENST00000296503 TCF3P15923 654 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 ZNF18P17022 549 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 SOX9P48436 509 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 UBXN1Q04323 297 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 ADIGQ0VDE8 80 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 USP4Q13107 963 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 DRAP1Q14919 205 aaPredicted RBP12.69□□□□□ -0.38
HMGB2-201ENST00000296503 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 PMF1Q6P1K2 205 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 SCD5Q86SK9 330 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 DDX42Q86XP3 938 aaKnown RBP eCLIP12.69□□□□□ -0.381e-22■■■□□ 14.6
HMGB2-201ENST00000296503 DHX40Q8IX18 779 aaKnown RBP12.69□□□□□ -0.38
HMGB2-201ENST00000296503 SPC24Q8NBT2 197 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 IPO4Q8TEX9 1081 aaKnown RBP12.69□□□□□ -0.38
HMGB2-201ENST00000296503 KCTD13Q8WZ19 329 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 NDRG1Q92597 394 aaKnown RBP12.69□□□□□ -0.38
HMGB2-201ENST00000296503 DDX23Q9BUQ8 820 aaKnown RBP12.69□□□□□ -0.38
HMGB2-201ENST00000296503 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.69□□□□□ -0.382e-35■■■□□ 15.2
HMGB2-201ENST00000296503 AJAP1Q9UKB5 411 aaPredicted RBP12.69□□□□□ -0.38
HMGB2-201ENST00000296503 SH3BP1Q9Y3L3 701 aa12.69□□□□□ -0.38
HMGB2-201ENST00000296503 LRRC10BA6NIK2 292 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 NCAM2O15394 837 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 IRF1P10914 325 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 ATP1A3P13637 1013 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 ARSAP15289 507 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 UCHL3P15374 230 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 YWHAGP61981 247 aaKnown RBP eCLIP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 NR1H3Q13133 447 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 BTBD8Q5XKL5 378 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 PM20D1Q6GTS8 502 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 DPY19L2P1Q6NXN4 242 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 TADA2BQ86TJ2 420 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 LRRC8AQ8IWT6 810 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 PJA1Q8NG27 643 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 HSFY1Q96LI6 401 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 LTB4R2Q9NPC1 389 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 CYLDQ9NQC7 956 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 HPS4Q9NQG7 708 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 FAM207AQ9NSI2 230 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 CLIC5Q9NZA1 410 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 DNMT3LQ9UJW3 386 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 MTF2Q9Y483 593 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 FHOD1Q9Y613 1164 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 TICRRQ7Z2Z1 1910 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 SPECC1L-ADORA2AF8WAN1 911 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 SLC9A3R1O14745 358 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 SCAMP3O14828 347 aaKnown RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 PNMA6AP0CW24 399 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 KRT9P35527 623 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 GPD2P43304 727 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 KLK7P49862 253 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 BPIFB4P59827 614 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 AMPD2Q01433 879 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 RSRC2Q7L4I2 434 aaKnown RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 CPA6Q8N4T0 437 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 CDK5RAP1Q96SZ6 601 aaKnown RBP12.68□□□□□ -0.38
HMGB2-201ENST00000296503 STK33Q9BYT3 514 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 L2HGDHQ9H9P8 463 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 PLCB1Q9NQ66 1216 aa12.68□□□□□ -0.38
HMGB2-201ENST00000296503 E2F8A0AVK6 867 aa12.67□□□□□ -0.38
HMGB2-201ENST00000296503 LGALS16A8MUM7 142 aa12.67□□□□□ -0.38
HMGB2-201ENST00000296503 MDM4O15151 490 aa12.67□□□□□ -0.38
HMGB2-201ENST00000296503 TARSP26639 723 aaKnown RBP12.67□□□□□ -0.38
HMGB2-201ENST00000296503 POLR2FP61218 127 aaKnown RBP12.67□□□□□ -0.38
HMGB2-201ENST00000296503 TPM4P67936 248 aa12.67□□□□□ -0.38
HMGB2-201ENST00000296503 GOLGA8FQ08AF8 430 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms