RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 MYCBPAPQ8TBZ2 947 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 ZCCHC14Q8WYQ9 949 aaKnown RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 DNAJC19Q96DA6 116 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 IQCDQ96DY2 449 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 PCED1BQ96HM7 432 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 HPDLQ96IR7 371 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 C8orf48Q96LL4 319 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 FNBP1Q96RU3 617 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 NAA15Q9BXJ9 866 aaKnown RBP11.22□□□□□ -0.61
RFC4-201ENST00000296273 TRIM9Q9C026 710 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 THAP9Q9H5L6 903 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 PDE11AQ9HCR9 933 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 CRTAC1Q9NQ79 661 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 MSRB2Q9Y3D2 182 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 CPQQ9Y646 472 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 ITIH6Q6UXX5 1313 aa11.22□□□□□ -0.61
RFC4-201ENST00000296273 THADAQ6YHU6 1953 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 FRMD3A2A2Y4 597 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 GOLGA8IPA6NC78 632 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 ZNF233A6NK53 670 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 SGK1O00141 431 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 HCRTO43612 131 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 STX10O60499 249 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 ATP2C2O75185 946 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 TOP3BO95985 862 aaKnown RBP11.21□□□□□ -0.61
RFC4-201ENST00000296273 OAS1P00973 400 aaKnown RBP11.21□□□□□ -0.61
RFC4-201ENST00000296273 FAM163BP0C2L3 166 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 ADH5P11766 374 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 ATP1A3P13637 1013 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 PTGER3P43115 390 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 KIR2DL1P43626 348 aaPredicted RBP11.21□□□□□ -0.61
RFC4-201ENST00000296273 MAPK8P45983 427 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 USP46P62068 366 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 GAD2Q05329 585 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 SEMA3BQ13214 749 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 COL9A2Q14055 689 aaPredicted RBP11.21□□□□□ -0.61
RFC4-201ENST00000296273 DUOXA1Q1HG43 343 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 DUOXA2Q1HG44 320 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 MAP7D1Q3KQU3 841 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 RHBDF2Q6PJF5 856 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 SLC36A4Q6YBV0 504 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 STXBP4Q6ZWJ1 553 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 TMEFF1Q8IYR6 380 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 PGBD3Q8N328 593 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 PDZD8Q8NEN9 1154 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 RLN3Q8WXF3 142 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 OVCA2Q8WZ82 227 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 MMS19Q96T76 1030 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 DUSP9Q99956 384 aaKnown RBP11.21□□□□□ -0.61
RFC4-201ENST00000296273 CBWD1Q9BRT8 395 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 RNF38Q9H0F5 515 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 KIAA1586Q9HCI6 787 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 ARHGEF4Q9NR80 690 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 TMEM74BQ9NUR3 256 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 EXOC1Q9NV70 894 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 TBC1D7Q9P0N9 293 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 PILRBQ9UKJ0 227 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 SLC6A14Q9UN76 642 aa11.21□□□□□ -0.61
RFC4-201ENST00000296273 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.21□□□□□ -0.611e-6■□□□□ 9.9
RFC4-201ENST00000296273 CHD6Q8TD26 2715 aa11.21□□□□□ -0.62
RFC4-201ENST00000296273 FRYQ5TBA9 3013 aa11.21□□□□□ -0.62
RFC4-201ENST00000296273 TCRBV21S2A2A0A5A6 115 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 E2F8A0AVK6 867 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 F8VP50 259 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 ZBTB24O43167 697 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 ZSCAN12O43309 604 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 HYAL3O43820 417 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 KLRC4O43908 158 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 TACC1O75410 805 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 ABL1P00519 1130 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 SERPINF2P08697 491 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 MBL2P11226 248 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 IDEP14735 1019 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 HNRNPLP14866 589 aaKnown RBP eCLIP11.2□□□□□ -0.62
RFC4-201ENST00000296273 SLC6A11P48066 632 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 SIM1P81133 766 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 CCZ1BP86790 482 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 CCZ1P86791 482 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 GFPT1Q06210 699 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 TAF10Q12962 218 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 TBX2Q13207 712 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 ACAP1Q15027 740 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 KMT5BQ4FZB7 885 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 BTBD8Q5XKL5 378 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 UNC13DQ70J99 1090 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 ARMCX6Q7L4S7 300 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 PIP4P1Q86T03 277 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 WDR49Q8IV35 697 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 HMGB4Q8WW32 186 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 NELFBQ8WX92 580 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 NAP1L5Q96NT1 182 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 ELOVL4Q9GZR5 314 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 PCIF1Q9H4Z3 704 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 CFAP97Q9P2B7 532 aa11.2□□□□□ -0.62
RFC4-201ENST00000296273 MBD1Q9UIS9 605 aaPredicted RBP11.2□□□□□ -0.62
RFC4-201ENST00000296273 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms