RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 PIWIL1Q96J94 861 aaKnown RBP20.84■□□□□ 0.93
TIMP4-201ENST00000287814 PPP1R13BQ96KQ4 1090 aa20.84■□□□□ 0.93
TIMP4-201ENST00000287814 FAM83CQ9BQN1 747 aa20.84■□□□□ 0.93
TIMP4-201ENST00000287814 KLF16Q9BXK1 252 aaPredicted RBP20.84■□□□□ 0.93
TIMP4-201ENST00000287814 NACA2Q9H009 215 aa20.84■□□□□ 0.93
TIMP4-201ENST00000287814 PDCL3Q9H2J4 239 aa20.84■□□□□ 0.93
TIMP4-201ENST00000287814 FBXL21Q9UKT6 434 aa20.84■□□□□ 0.93
TIMP4-201ENST00000287814 TMEM221A6NGB7 291 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 M0R296 226 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 FBXO21O94952 628 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 RALAP11233 206 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 ARHGAP29Q52LW3 1261 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 KLHDC10Q6PID8 442 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 SIX5Q8N196 739 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 IRGQQ8WZA9 623 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 IRF7Q92985 503 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 PCDHB18PQ96TA0 734 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 LINC00597Q9H2U6 94 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 CFAP97Q9P2B7 532 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 WNT6Q9Y6F9 365 aa20.83■□□□□ 0.93
TIMP4-201ENST00000287814 ERBB2P04626 1255 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 FYNP06241 537 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 SLC44A4Q53GD3 710 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 BTBD8Q5XKL5 378 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 ZNF677Q86XU0 584 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 TMEM35BQ8NCS4 154 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 TTC8Q8TAM2 541 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 EDEM3Q9BZQ6 932 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 HEBP1Q9NRV9 189 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 THG1LQ9NWX6 298 aaKnown RBP20.83■□□□□ 0.92
TIMP4-201ENST00000287814 GTSE1Q9NYZ3 720 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 DNMT3LQ9UJW3 386 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 MYO6Q9UM54 1294 aa20.83■□□□□ 0.92
TIMP4-201ENST00000287814 COL4A3Q01955 1670 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 OTOL1A6NHN0 477 aaPredicted RBP20.82■□□□□ 0.92
TIMP4-201ENST00000287814 SHISA7A6NL88 538 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 GREM1O60565 184 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 NOMO3P69849 1222 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 PFKPQ01813 784 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 EFEMP1Q12805 493 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 TAF5Q15542 800 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 MIB1Q86YT6 1006 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 CPA5Q8WXQ8 436 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 DNASE1L2Q92874 299 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 EBF3Q9H4W6 596 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 TRPV5Q9NQA5 729 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 HPS4Q9NQG7 708 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 CEP83Q9Y592 693 aa20.82■□□□□ 0.92
TIMP4-201ENST00000287814 LTFP02788 710 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 CYP1A1P04798 512 aaPredicted RBP20.81■□□□□ 0.92
TIMP4-201ENST00000287814 IRF1P10914 325 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 ARSAP15289 507 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 FERP16591 822 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 C2CD6Q53TS8 623 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 NAA35Q5VZE5 725 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 CC2D1AQ6P1N0 951 aaPredicted RBP20.81■□□□□ 0.92
TIMP4-201ENST00000287814 OLIG1Q8TAK6 271 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 OSCP1Q8WVF1 389 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 CPLX3Q8WVH0 158 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 NUP58Q9BVL2 599 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 ARHGEF3Q9NR81 526 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 ABCC13Q9NSE7 274 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 AIPL1Q9NZN9 384 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 RASAL2Q9UJF2 1139 aa20.81■□□□□ 0.92
TIMP4-201ENST00000287814 GPR37L1O60883 481 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 LSM8O95777 96 aaKnown RBP20.8■□□□□ 0.92
TIMP4-201ENST00000287814 RSRC2Q7L4I2 434 aaKnown RBP20.8■□□□□ 0.92
TIMP4-201ENST00000287814 NOX5Q96PH1 765 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 SYT11Q9BT88 431 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 DUS2Q9NX74 493 aaKnown RBP20.8■□□□□ 0.92
TIMP4-201ENST00000287814 HELZP42694 1942 aaKnown RBP20.8■□□□□ 0.92
TIMP4-201ENST00000287814 A0A1W2PQJ5 194 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 CBFA2T2O43439 604 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 GYPCP04921 128 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 SOX9P48436 509 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 PLCB2Q00722 1185 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 EML3Q32P44 896 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 FAM183BPQ6ZVS7 135 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 TADA2BQ86TJ2 420 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 CDK5RAP1Q96SZ6 601 aaKnown RBP20.8■□□□□ 0.92
TIMP4-201ENST00000287814 AGPAT1Q99943 283 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 MARCH2Q9P0N8 246 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 SFMBT1Q9UHJ3 866 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 NAALADL1Q9UQQ1 740 aa20.8■□□□□ 0.92
TIMP4-201ENST00000287814 KIF26AQ9ULI4 1882 aaPredicted RBP20.79■□□□□ 0.92
TIMP4-201ENST00000287814 COL4A2P08572 1712 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 E2F8A0AVK6 867 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 CD72P21854 359 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 GABRB2P47870 512 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 MLF2Q15773 248 aaPredicted RBP20.79■□□□□ 0.92
TIMP4-201ENST00000287814 SFMBT2Q5VUG0 894 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 SYPL2Q5VXT5 272 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 OR6B2Q6IFH4 312 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 SARM1Q6SZW1 724 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 OLFML1Q6UWY5 402 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 ERICH1Q86X53 443 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 DDX42Q86XP3 938 aaKnown RBP eCLIP20.79■□□□□ 0.92
TIMP4-201ENST00000287814 SLC30A5Q8TAD4 765 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 RNF139Q8WU17 664 aa20.79■□□□□ 0.92
TIMP4-201ENST00000287814 PBXIP1Q96AQ6 731 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms