RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PCDH8O95206 1070 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 CYP2F1P24903 491 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 OR1E1P30953 314 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 ERMARDQ5T6L9 678 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 LVRNQ6Q4G3 990 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 TFAP2DQ7Z6R9 452 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 PHACTR4Q8IZ21 702 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 KIAA0319LQ8IZA0 1049 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 WNK4Q96J92 1243 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 LACRTQ9GZZ8 138 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 LNPEPQ9UIQ6 1025 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 CDYLQ9Y232 598 aa19.13■□□□□ 0.65
PCDH1-201ENST00000287008 LZTR1Q8N653 840 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 MTMR9Q96QG7 549 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 SYT17Q9BSW7 474 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 FICDQ9BVA6 458 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 TMEM161AQ9NX61 479 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 SUFUQ9UMX1 484 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 EVPLLA8MZ36 301 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 RAP1GDS1P52306 607 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 ZC3H12BQ5HYM0 836 aaKnown RBP19.12■□□□□ 0.65
PCDH1-201ENST00000287008 BDNFP23560 247 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 FLT3LGP49771 235 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 PMS1P54277 932 aaKnown RBP19.12■□□□□ 0.65
PCDH1-201ENST00000287008 HPCAP84074 193 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 PCBP1Q15365 356 aaKnown RBP eCLIP19.12■□□□□ 0.65
PCDH1-201ENST00000287008 KCNK18Q7Z418 384 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 ECT2Q9H8V3 914 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 KLHL2O95198 593 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 HMGCRP04035 888 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 SMIM10L2AP0DMW4 78 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 SMIM10L2BP0DMW5 78 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 PEX19P40855 299 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 CCL23P55773 120 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 PRKCQQ04759 706 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 CAMK2GQ13555 558 aaPredicted RBP19.12■□□□□ 0.65
PCDH1-201ENST00000287008 CCNG2Q16589 344 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 C1orf186Q6ZWK4 172 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 MYO1HQ8N1T3 1032 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 FAM167BQ9BTA0 163 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 TMEM121Q9BTD3 319 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 FTHL17Q9BXU8 183 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 TNFSF13BQ9Y275 285 aa19.12■□□□□ 0.65
PCDH1-201ENST00000287008 CFAP73A6NFT4 308 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 TUBP50607 506 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 MRPS6P82932 125 aaKnown RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 DEFB106AQ8N104 65 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 ARMC2Q8NEN0 867 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 CELF6Q96J87 481 aaKnown RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 TRIM4Q9C037 500 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 DCLK3Q9C098 648 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 KCNMB3Q9NPA1 279 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 MRPL17Q9NRX2 175 aaKnown RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 TMEM51Q9NW97 253 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 ALOX15P16050 662 aaPredicted RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 PREPLQ4J6C6 727 aaPredicted RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 RARS2Q5T160 578 aaKnown RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 RBM43Q6ZSC3 357 aaKnown RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 C11orf96Q7Z7L8 435 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 OSGEPL1Q9H4B0 414 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 TBC1D13Q9NVG8 400 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 SFMBT1Q9UHJ3 866 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 MSRAQ9UJ68 235 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 SPACA6W5XKT8 324 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 LTFP02788 710 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 MLH1P40692 756 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 SLC12A3P55017 1021 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 HNRNPH2P55795 449 aaKnown RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 CES5AQ6NT32 575 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 PLPPR4Q7Z2D5 763 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 SCUBE3Q8IX30 993 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 FBXO36Q8NEA4 188 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 DACH2Q96NX9 599 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 KCNK16Q96T55 309 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 PABPC3Q9H361 631 aaKnown RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 SYTL2Q9HCH5 934 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 PPLO60437 1756 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 FKBP9O95302 570 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 GLRA2P23416 452 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 FKBP9P1Q75LS8 142 aa19.11■□□□□ 0.65
PCDH1-201ENST00000287008 USP15Q9Y4E8 981 aaPredicted RBP19.11■□□□□ 0.65
PCDH1-201ENST00000287008 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 TMEM88BA6NKF7 163 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 TRIM16O95361 564 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 PRLRP16471 622 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 BTNL9Q6UXG8 535 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 KAT2BQ92831 832 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 CCDC126Q96EE4 140 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 IGFLR1Q9H665 355 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 WDR41Q9HAD4 459 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 TSPAN3O60637 253 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 MICAL2O94851 1124 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 ARIH2O95376 493 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 KCNK10P57789 538 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 OTULINQ96BN8 352 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 SERPINB12Q96P63 405 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 RNF112Q9ULX5 631 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 ANKRD63C9JTQ0 380 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 GLRA3O75311 464 aa19.1■□□□□ 0.65
PCDH1-201ENST00000287008 SLURP2P0DP57 97 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms