RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 MYADML2A6NDP7 307 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 PMM2O15305 246 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 AP1G1O43747 822 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 PGK1P00558 417 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 ENO1P06733 434 aaKnown RBP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 HNRNPCP07910 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 FASTKD3Q14CZ7 662 aaKnown RBP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 TBCCQ15814 346 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 CCDC142Q17RM4 750 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 MMEL1Q495T6 779 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 HP1BP3Q5SSJ5 553 aaPredicted RBP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 KYAT3Q6YP21 454 aaKnown RBP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 TLK2Q86UE8 772 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 ALDH16A1Q8IZ83 802 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 RDM1Q8NG50 284 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 ZNF296Q8WUU4 475 aaPredicted RBP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 TMEM174Q8WUU8 243 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 SOCS4Q8WXH5 440 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 KCNK4Q9NYG8 393 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 KCND2Q9NZV8 630 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 TAGLN3Q9UI15 199 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 PLA2G4CQ9UP65 541 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 CAPN14A8MX76 684 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 K7ENM7 598 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 GPR25O00155 361 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 CSDE1O75534 798 aaKnown RBP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 USP1O94782 785 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 RPL5P46777 297 aaKnown RBP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 MFAP3P55082 362 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 ADARP55265 1226 aaKnown RBP10.92□□□□□ -0.66
ERCC3-201ENST00000285398 IRX4P78413 519 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 KLHL38Q2WGJ6 581 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 ADGRD1Q6QNK2 874 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 C1orf21Q9H246 121 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 C17orf75Q9HAS0 396 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 S100A14Q9HCY8 104 aa10.92□□□□□ -0.66
ERCC3-201ENST00000285398 WDR81Q562E7 1941 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 ZBTB42B2RXF5 422 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 MXI1P50539 228 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 LAMC2Q13753 1193 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 EMC2Q15006 297 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 PDK3Q15120 406 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 C1orf228Q6PIY5 440 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 ZNF554Q86TJ5 538 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 MAP7D3Q8IWC1 876 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 DDX1Q92499 740 aaKnown RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 FAM118BQ9BPY3 351 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 AVENQ9NQS1 362 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 SLC17A7Q9P2U7 560 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 MYH11P35749 1972 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 RANBP2P49792 3224 aaKnown RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 PSTPIP1O43586 416 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 LPXNO60711 386 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 OR6B1O95007 311 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 CCND3P30281 292 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 CLEC16AQ2KHT3 1053 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 ANKRD20A4Q4UJ75 823 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 FAM160B1Q5W0V3 765 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 RHOT1Q8IXI2 618 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 C12orf56Q8IXR9 622 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 PPM1KQ8N3J5 372 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 PPTC7Q8NI37 304 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 PRICKLE1Q96MT3 831 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 C16orf70Q9BSU1 422 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 POLR3FQ9H1D9 316 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 TMEM165Q9HC07 324 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 ALG13Q9NP73 1137 aaKnown RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 ANKEF1Q9NU02 776 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 PAIP2BQ9ULR5 123 aaKnown RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 SHOC2Q9UQ13 582 aa10.91□□□□□ -0.66
ERCC3-201ENST00000285398 GNEQ9Y223 722 aaKnown RBP10.91□□□□□ -0.66
ERCC3-201ENST00000285398 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 RBM47A0AV96 593 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ATP5BP06576 529 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 MMP3P08254 477 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 C6orf222P0C671 652 aaPredicted RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 NPTX2P47972 431 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ERFP50548 548 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ARSEP51690 589 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 CLCN3P51790 818 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 KDSRQ06136 332 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 CACNB2Q08289 660 aaPredicted RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 GPS1Q13098 491 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 DCTN2Q13561 401 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ALYREFQ86V81 257 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ZSWIM2Q8NEG5 633 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 PLEKHO2Q8TD55 490 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 SLC7A3Q8WY07 619 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ABTB1Q969K4 478 aaPredicted RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 CLPTM1LQ96KA5 538 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 BTBD9Q96Q07 612 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 PAFAH2Q99487 392 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 TMEM117Q9H0C3 514 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 WWP1Q9H0M0 922 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ZNF232Q9UNY5 417 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ZNF148Q9UQR1 794 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 FAM237BA0A1B0GVD1 139 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 CCDC160A6NGH7 325 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms