RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 UTYO14607 1347 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 CCNA2P20248 432 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 SWI5Q1ZZU3 235 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 TIMM50Q3ZCQ8 353 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 SPATA4Q8NEY3 305 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 SGF29Q96ES7 293 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 TMEM117Q9H0C3 514 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 ACTR8Q9H981 624 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 GPR108Q9NPR9 543 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 RASSF1Q9NS23 344 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 FAM25EA8MYX2 175 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 MAGEB2O15479 319 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 ODC1P11926 461 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 ZBTB49Q6ZSB9 765 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 DAW1Q8N136 415 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 C1QTNF7Q9BXJ2 289 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 STAG3L1P0CL83 205 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 IL6STP40189 918 aaPredicted RBP13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 OMPP47874 163 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 SPP2Q13103 211 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 NR6A1Q15406 480 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 SETD9Q8NE22 299 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 CRYL1Q9Y2S2 319 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 LYVE1Q9Y5Y7 322 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L15C9J2P7 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L13C9JLJ4 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L11C9JVI0 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L18D6R9N7 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L22D6RA61 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L17D6RBQ6 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L19D6RCP7 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L20D6RJB6 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 GPD1P21695 349 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 LIFRP42702 1097 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 ATP2C1P98194 919 aaPredicted RBP13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 RGS1Q08116 209 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L24Q0WX57 530 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 USP17L6PQ6QN14 398 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 COLGALT2Q8IYK4 626 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 COLEC11Q9BWP8 271 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 SHCBP1LQ9BZQ2 653 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 DPY30Q9C005 99 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 GPRC5DQ9NZD1 345 aa13.59□□□□□ -0.23
SMARCA5-201ENST00000283131 RPRD2Q5VT52 1461 aaKnown RBP13.58□□□□□ -0.23
SMARCA5-201ENST00000283131 CYP2A7P20853 494 aa13.58□□□□□ -0.23
SMARCA5-201ENST00000283131 EPHB2P29323 1055 aa13.58□□□□□ -0.23
SMARCA5-201ENST00000283131 MAGEA4P43358 317 aa13.58□□□□□ -0.23
SMARCA5-201ENST00000283131 GEMIN4P57678 1058 aaKnown RBP13.58□□□□□ -0.23
SMARCA5-201ENST00000283131 TRMT11Q7Z4G4 463 aaKnown RBP13.58□□□□□ -0.23
SMARCA5-201ENST00000283131 C9orf72Q96LT7 481 aa13.58□□□□□ -0.23
SMARCA5-201ENST00000283131 ATP1A3P13637 1013 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 MAD2L1Q13257 205 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 LRIG3Q6UXM1 1119 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 CCDC36Q8IYA8 594 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 MAGEB3O15480 346 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 PRKAB2O43741 272 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 EGFRP00533 1210 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ALDH3A2P51648 485 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 TRAPPC11Q7Z392 1133 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 CBWD2Q8IUF1 395 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 KIF2BQ8N4N8 673 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 MARCH10Q8NA82 808 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 SLC35G2Q8TBE7 412 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ROPN1BQ9BZX4 212 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ROPN1Q9HAT0 212 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 SPEF1Q9Y4P9 236 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 INSRP06213 1382 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 FASP25445 335 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ZNF605Q86T29 641 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 OR52L1Q8NGH7 329 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 NUAK2Q9H093 628 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 BSDC1Q9NW68 430 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 SUCOQ9UBS9 1254 aaKnown RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 STOML2Q9UJZ1 356 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 FBXL21Q9UKT6 434 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 CKMP06732 381 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 CARNMT1Q8N4J0 409 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 RPRD1AQ96P16 312 aaPredicted RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ZNF222Q9UK12 451 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 MAFFQ9ULX9 164 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 TMEM120BA0PK00 339 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 GLRA3O75311 464 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ABATP80404 500 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 C4orf46Q504U0 113 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 ZNF248Q8NDW4 579 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 MASTLQ96GX5 879 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 RHOBTB2Q9BYZ6 727 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 PRRG4Q9BZD6 226 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 MCUBQ9NWR8 336 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 RAB23Q9ULC3 237 aa13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 TDRKHQ9Y2W6 561 aaKnown RBP13.58□□□□□ -0.24
SMARCA5-201ENST00000283131 TFRCP02786 760 aaKnown RBP13.57□□□□□ -0.24
SMARCA5-201ENST00000283131 ANXA6P08133 673 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms