RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 NCF1BA6NI72 391 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 NCF1CA8MVU1 366 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 H3BN98 237 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 NCF1P14598 390 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 PTSQ03393 145 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ZNF177Q13360 481 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 CCDC157Q569K6 752 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 TDRD10Q5VZ19 366 aaKnown RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ZNF605Q86T29 641 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 PJA1Q8NG27 643 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 SLC30A5Q8TAD4 765 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 FIG4Q92562 907 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 AP3S1Q92572 193 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 GPRASP2Q96D09 838 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 NFKBIZQ9BYH8 718 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 NIF3L1Q9GZT8 377 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 A0A088AWK7 358 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 KLHL41O60662 606 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 LCA5LO95447 670 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 CRTAMO95727 393 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ENO2P09104 434 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ZNF10P21506 573 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 MUTP22033 750 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 GRIK3Q13003 919 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 MYBPC2Q14324 1141 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 SMTNL2Q2TAL5 461 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ERO1BQ86YB8 467 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 TMEM132CQ8N3T6 1108 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 FAM129BQ96TA1 746 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ADGRE3Q9BY15 652 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 GANQ9H2C0 597 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 STOML2Q9UJZ1 356 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 KPNA6O60684 536 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 CCNA2P20248 432 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 DSG3P32926 999 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 EMC2Q15006 297 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 CCDC144BQ3MJ40 725 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ABRAXAS1Q6UWZ7 409 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 DENND5BQ6ZUT9 1274 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 TMEM47Q9BQJ4 181 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ZCCHC17Q9NP64 241 aaKnown RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ATP9AO75110 1047 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 FKBP6O75344 327 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ZCCHC18P0CG32 403 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 CYB5D1Q6P9G0 228 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 SLC13A5Q86YT5 568 aaPredicted RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 OR52L1Q8NGH7 329 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 AIFM3Q96NN9 605 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ERP44Q9BS26 406 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ZCCHC2Q9C0B9 1178 aaKnown RBP8.98□□□□□ -0.97
NIPBL-201ENST00000282516 MYRFQ9Y2G1 1151 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 H7C4K7 107 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 PMPCBO75439 489 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 NAB2Q15742 525 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 NOTUMQ6P988 496 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 ARHGAP22Q7Z5H3 698 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 MED8Q96G25 268 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 DSN1Q9H410 356 aa8.98□□□□□ -0.97
NIPBL-201ENST00000282516 LRG1P02750 347 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 FASP25445 335 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 IZUMO2Q6UXV1 221 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 RPTNQ6XPR3 784 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 C9orf16Q9BUW7 83 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 TMEM138Q9NPI0 162 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 FAM49BQ9NUQ9 324 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 USP17L10C9JJH3 530 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 F5H5T6 163 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 IFRD1O00458 451 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 NCAM1P13591 858 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 GARTP22102 1010 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 R3HDM1Q15032 1099 aaKnown RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 LMBRD2Q68DH5 695 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 PROSER1Q86XN7 944 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 KCTD10Q9H3F6 313 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ING4Q9UNL4 249 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ANKRD6Q9Y2G4 727 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 PCDHB2Q9Y5E7 798 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 SNUPNO95149 360 aaKnown RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 TRAP1Q12931 704 aaKnown RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 PDIA5Q14554 519 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 GLB1LQ6UWU2 654 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 GATAD2AQ86YP4 633 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 GDPD5Q8WTR4 605 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 SLAIN2Q9P270 581 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 MAPRE3Q9UPY8 281 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 A0A0X1KG70 313 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 PGM3O95394 542 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 EGFRP00533 1210 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 FMR1NBQ8N0W7 255 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 OSBP2Q969R2 916 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ISCUQ9H1K1 167 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 RIBC2Q9H4K1 309 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.97□□□□□ -0.97
NIPBL-201ENST00000282516 C1orf232A0A0U1RR37 186 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 CHURC1-FNTBB4DL54 471 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ADGRF4Q8IZF3 695 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 CAMKK1Q8N5S9 505 aa8.97□□□□□ -0.97
NIPBL-201ENST00000282516 ADAM33Q9BZ11 813 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms