RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 VSTM1Q6UX27 236 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 DENND5BQ6ZUT9 1274 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ZNF467Q7Z7K2 595 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 TP53INP2Q8IXH6 220 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 PLD5Q8N7P1 536 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 TTC13Q8NBP0 860 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 B3GALNT2Q8NCR0 500 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SLC35F5Q8WV83 523 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ATXN2LQ8WWM7 1075 aaKnown RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ZNF560Q96MR9 790 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 RNF157Q96PX1 679 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SMC6Q96SB8 1091 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 PCDH18Q9HCL0 1135 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 PCDH10Q9P2E7 1040 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 MYBPHLA2RUH7 354 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 AP1G2O75843 785 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 CD4P01730 458 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 USP17L7P0C7H9 530 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ATP5DP30049 168 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 MSH2P43246 934 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 BCAT1P54687 386 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 OLIG2Q13516 323 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 BMPR2Q13873 1038 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SPARCL1Q14515 664 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 STAT4Q14765 748 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 KYAT1Q16773 422 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ANKRD20A8PQ5CZ79 823 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 KCNT2Q6UVM3 1135 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 RASAL3Q86YV0 1011 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 IFNLR1Q8IU57 520 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 NIPA2Q8N8Q9 360 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ANKS4BQ8N8V4 417 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SMG8Q8ND04 991 aaKnown RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 CMASQ8NFW8 434 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 CCHCR1Q8TD31 782 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 NKD2Q969F2 451 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ATXN7L3BQ96GX2 97 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SENP8Q96LD8 212 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SIK2Q9H0K1 926 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 TSPYL2Q9H2G4 693 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SPC25Q9HBM1 224 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ZFYVE28Q9HCC9 887 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 MIOSQ9NXC5 875 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SNX10Q9Y5X0 201 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 XPOTO43592 962 aaKnown RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 USP12O75317 370 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 NCAM1P13591 858 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 AKR1A1P14550 325 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 RPA3P35244 121 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ARL4AP40617 200 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 TKTL1P51854 596 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 GPX6P59796 221 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 PURAQ00577 322 aaKnown RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 OVGP1Q12889 678 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 TTC31Q49AM3 519 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 MORN1Q5T089 497 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 RGMBQ6NW40 437 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 CES3Q6UWW8 571 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 IFNL1Q8IU54 200 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 FUKQ8N0W3 1084 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ANKRD52Q8NB46 1076 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 FNIP1Q8TF40 1166 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 TNIP3Q96KP6 325 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 PAFAH2Q99487 392 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 SLC13A1Q9BZW2 595 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ROPN1BQ9BZX4 212 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 AGO3Q9H9G7 860 aaKnown RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ROPN1Q9HAT0 212 aaPredicted RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 TRMT13Q9NUP7 481 aaKnown RBP6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 ABCF3Q9NUQ8 709 aa6.29□□□□□ -1.4
TNFSF4-201ENST00000281834 PTGESO14684 152 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 INHBAP08476 426 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 SRGAP2BP0DMP2 458 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 GNAT1P11488 350 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 PTPN1P18031 435 aaKnown RBP6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 ARPP19P56211 112 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 PRKCZQ05513 592 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 KBTBD12Q3ZCT8 623 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 SV2CQ496J9 727 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 BOLA3Q53S33 107 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 ARHGEF18Q6ZSZ5 1173 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 KDELC2Q7Z4H8 507 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 SAPCD2Q86UD0 394 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 ATP11CQ8NB49 1132 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 C3orf58Q8NDZ4 430 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 TRPV1Q8NER1 839 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 PPM1EQ8WY54 764 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 TRIB2Q92519 343 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 KCNN1Q92952 543 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 APBA2Q99767 749 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 APOL2Q9BQE5 337 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 ULBP1Q9BZM6 244 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 PLEKHA5Q9HAU0 1116 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 ETNK1Q9HBU6 452 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 FAM105AQ9NUU6 356 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 SLC17A6Q9P2U8 582 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 DCTN4Q9UJW0 460 aa6.28□□□□□ -1.4
TNFSF4-201ENST00000281834 SHOC2Q9UQ13 582 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms