RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 RAB6CQ53S08 254 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 C4orf22Q6V702 233 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 PHLDB2Q86SQ0 1253 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 GAD1Q99259 594 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 CRISPLD2Q9H0B8 497 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 RAB6CQ9H0N0 254 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 FAM204AQ9H8W3 233 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 TRMT13Q9NUP7 481 aaKnown RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 CPSF2Q9P2I0 782 aaKnown RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 ALPK3Q96L96 1907 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 HELZP42694 1942 aaKnown RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 BEST1O76090 585 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 NR2C2P49116 596 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 DHX9Q08211 1270 aaKnown RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 EFHC2Q5JST6 749 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 WSCD1Q658N2 575 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 PCGF5Q86SE9 256 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 GDAP1L1Q96MZ0 367 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 SNX25Q9H3E2 840 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 WDR6Q9NNW5 1121 aaKnown RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 TPD52L2O43399 206 aaKnown RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 C1QAP02745 245 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 INHAP05111 366 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 PDGFRAP16234 1089 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 HOXC13P31276 330 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 NRG1Q02297 640 aaPredicted RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 TAF5Q15542 800 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 ANKRD20A8PQ5CZ79 823 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 CLLU1OSQ5K130 101 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 ANKRD33Q7Z3H0 272 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 GLIS1Q8NBF1 620 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 OR6B3Q8NGW1 331 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 LPIN3Q9BQK8 851 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 RASSF4Q9H2L5 321 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 CENPHQ9H3R5 247 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 PPCSQ9HAB8 311 aa10.6□□□□□ -0.71
SEC24D-201ENST00000280551 MTRF1LQ9UGC7 380 aaKnown RBP10.6□□□□□ -0.71
SEC24D-201ENST00000280551 ALOX15BO15296 676 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 KRT10P13645 584 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 NOS2P35228 1153 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 THPOP40225 353 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 PEX19P40855 299 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 ITGA8P53708 1063 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 SLC18A1P54219 525 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 DAOAP59103 153 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 DPYSQ14117 519 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 KCNJ11Q14654 390 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 ERMARDQ5T6L9 678 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 SLC24A5Q71RS6 500 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 FAM35AQ86V20 835 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 PIGZQ86VD9 579 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 MYLKQ15746 1914 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 B4GALT3O60512 393 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 RNF8O76064 485 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 TTC4O95801 387 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 KRT14P02533 472 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 STIP1P31948 543 aaKnown RBP10.59□□□□□ -0.71
SEC24D-201ENST00000280551 CA8P35219 290 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 PAFAH1B3Q15102 231 aaKnown RBP10.59□□□□□ -0.71
SEC24D-201ENST00000280551 PCDH19Q8TAB3 1148 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 VWCEQ96DN2 955 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 CEP295NLQ96MC4 621 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 CFAP57Q96MR6 1250 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 SNRNP25Q9BV90 132 aaKnown RBP10.59□□□□□ -0.71
SEC24D-201ENST00000280551 ZCWPW1Q9H0M4 648 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 DPH5Q9H2P9 285 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 CFAP69A5D8W1 941 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 ODC1P11926 461 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 GCAP28676 217 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 CHKAP35790 457 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 ADAT2Q7Z6V5 191 aaKnown RBP10.59□□□□□ -0.71
SEC24D-201ENST00000280551 SRLQ86TD4 932 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 ZNF276Q8N554 614 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 CLEC4CQ8WTT0 213 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 FAM172AQ8WUF8 416 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 APBB2Q92870 758 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 WDR83Q9BRX9 315 aaKnown RBP10.59□□□□□ -0.71
SEC24D-201ENST00000280551 ACTL7BQ9Y614 415 aa10.59□□□□□ -0.71
SEC24D-201ENST00000280551 FKTNO75072 461 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 PECAM1P16284 738 aaPredicted RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 MMP13P45452 471 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 SCNN1GP51170 649 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 OTUD4Q01804 1114 aaKnown RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 TFDP2Q14188 446 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 C15orf59Q2T9L4 293 aaPredicted RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 P3H1Q32P28 736 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 HSP90B2PQ58FF3 399 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 SCUBE3Q8IX30 993 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 ACTL9Q8TC94 416 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 PCED1BQ96HM7 432 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 SERPINB12Q96P63 405 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 SYT15Q9BQS2 421 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 SEMA4AQ9H3S1 761 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 TPX2Q9ULW0 747 aaKnown RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 ARHGEF37A1IGU5 675 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 GOLGA8SH3BPF8 625 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 GCATO75600 419 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 TFE3P19532 575 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms